| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950234
Identifier: 153950234
GI number: 153950234
Start: 4275836
End: 4276972
Strand: Direct
Name: 153950234
Synonym: YpsIP31758_3791
Alternate gene names: NA
Gene position: 4275836-4276972 (Clockwise)
Preceding gene: 153950710
Following gene: 153949800
Centisome position: 90.53
GC content: 53.21
Gene sequence:
>1137_bases ATGATGACAACCCAACCGCCGGTTTATCGCCGGGAATTGTCAGGGGGCACGTTGACGGTGATACCTAACAGTAGCAATAT CCCGCTGGATTCGCTCTTTGATATTGCCGAACGCCGTAACCCTAAGCGCGCCTTCCTTTTTGTTAGCAAAGTTCTGGGGC GGCACATCCCTGTTAGCCCTGCCACCATGCGCAATGTCTATCGCCAATTGGCGGAGAGATTTCCCGCAGACCTACCAGGC CCCGTTCTGTTTATTGGCATGGCTGAAACTGCAGTAGGTCTGGCTGCTGGTGTATTTCAAGAGCTACGCGGCACGGTCGC TGAACCGGTTTTTTTGACGTCAACCCGGCATCCGGTTGATGGCGATTTGCTGTGCGAATTCAAAGAAAACCATAGCCATG CAACGGATCACCTGCTCTATTTGCCGTCTGACCCCGTGTTGCGCGCACGCCTGCAACGCGCCCGTTCAGTGGTTCTTATT GACGATGAGGCTACCACGGGGAACACCTTTATCAACCTTCTTCAGGCATTACGTGATGCCAATCTGAATGGCCTTGAAAA GGTGGTTGCCGTCACCCTGACCGACTGGAGCGGTAGCGCACTGACGGAACGGTGCCCTTTGCCAGTCACCACCGTTTCAC TTATCACCGGGGAGTGGAACTGGTCACCCATCCCTGATGCCCCGGTGCCCGTGATGCCCGCCTGTAATGTCACTGCCCGT GGCAAGGTTGCCATCACCGATAAACAAAATTGGGGCCGGCTCGGCATGGATGAAACCCGTGCTGATATCGGCCATAAGGT CCATGTACTGGCCGGTGAAAAAGTGCTGGTCCTTGGTACCAGCGAGTTTGTCTGGCAACCTTTCTTATTGGCTGAGAGGC TGGAACATGCCGGGGCTAACGTCAAATTTAGCTCGATAACCCGCTCACCGATTGCACAAGGCCATGCTATTAACTCAATC ATCGCGTTCAGCGATAACTACGGTCTAGGGATCCCCAATTTCCTCTATAACGTCGCTCATCAGCATTTTGATCGCATTAT CGTTTGTGTCGAAACACCAGCCGAATCTATTGATCCCACGCTGATTGAACAGCTTCGCACGGTGGCACCTTGTGTGGAGG TTATTGCTTATGAATAA
Upstream 100 bases:
>100_bases CGGTTGCACATTTTAAGCCTGTCAGCGTGAGAGCGATGACCGATGCACTGCCGTTCCCCGCTGAATTGCAAAATCTTACT CATTTCTAAAAAGGACAGTC
Downstream 100 bases:
>100_bases GCCTGTTTTTTTGTGTGATCTGGACGATACGCTGTTCCAGACACGGCGCAAAATGGTCGATGAGCTAGACCTTCCTCCTT TTCGGGTAGGGGCGTTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSPATMRNVYRQLAERFPADLPG PVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVDGDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLI DDEATTGNTFINLLQALRDANLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGANVKFSSITRSPIAQGHAINSI IAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPTLIEQLRTVAPCVEVIAYE
Sequences:
>Translated_378_residues MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSPATMRNVYRQLAERFPADLPG PVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVDGDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLI DDEATTGNTFINLLQALRDANLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGANVKFSSITRSPIAQGHAINSI IAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPTLIEQLRTVAPCVEVIAYE >Mature_378_residues MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSPATMRNVYRQLAERFPADLPG PVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVDGDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLI DDEATTGNTFINLLQALRDANLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGANVKFSSITRSPIAQGHAINSI IAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPTLIEQLRTVAPCVEVIAYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41477; Mature: 41477
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSP CCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCH ATMRNVYRQLAERFPADLPGPVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVD HHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC GDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLIDDEATTGNTFINLLQALRDA CCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCC NLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR CCCCCCEEEEEEEECCCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGAN CEEEEECCCCCCCCCCCHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHHCCCC VKFSSITRSPIAQGHAINSIIAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPT EEECCCCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCHH LIEQLRTVAPCVEVIAYE HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMTTQPPVYRRELSGGTLTVIPNSSNIPLDSLFDIAERRNPKRAFLFVSKVLGRHIPVSP CCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCH ATMRNVYRQLAERFPADLPGPVLFIGMAETAVGLAAGVFQELRGTVAEPVFLTSTRHPVD HHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC GDLLCEFKENHSHATDHLLYLPSDPVLRARLQRARSVVLIDDEATTGNTFINLLQALRDA CCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCC NLNGLEKVVAVTLTDWSGSALTERCPLPVTTVSLITGEWNWSPIPDAPVPVMPACNVTAR CCCCCCEEEEEEEECCCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC GKVAITDKQNWGRLGMDETRADIGHKVHVLAGEKVLVLGTSEFVWQPFLLAERLEHAGAN CEEEEECCCCCCCCCCCHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHHCCCC VKFSSITRSPIAQGHAINSIIAFSDNYGLGIPNFLYNVAHQHFDRIIVCVETPAESIDPT EEECCCCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCHH LIEQLRTVAPCVEVIAYE HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA