| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is cls [H]
Identifier: 153950203
GI number: 153950203
Start: 2252731
End: 2254191
Strand: Direct
Name: cls [H]
Synonym: YpsIP31758_1953
Alternate gene names: 153950203
Gene position: 2252731-2254191 (Clockwise)
Preceding gene: 153947659
Following gene: 153947787
Centisome position: 47.69
GC content: 46.61
Gene sequence:
>1461_bases ATGACGACATTTTATACCGTAATCAGTTGGCTTTCCGTTTTTGGCTACTGGTTACTCATTGCCGGGGTAACATTGCGTAT TCTGATGAAACGCAGGGCCGTTCCTTCTGCTATGGCTTGGTTACTGATTATCTACATTCTGCCATTGGTGGGGATAATTG CTTACCTTTCATTCGGTGAATTGCATTTGGGTAAGCGGCGTGCTGAACGAGCTAAAGCCATGTGGCCATCGACCGCTCGC TGGCTGAGTGAACTCAAGGAATGCCAACATATCTTTGCTAACTCTAATAGCGAAGTTGCCAGCCCACTGTTTCAATTATG TGAACGGCGTCAAGGAATAAACGGTGTTAAAGGAAATCAACTACAACTATTAACAACAACCGATGACACACTAAAAGCGC TAGTACGAGATATTGAACTCGCCCGCCACAATATAGAAATGGTGTTTTATATTTGGCAACCTGGTGGTCTGGTCGATCAG GTGGCTGAATCGTTGATGGCTGCGGCTCGACGCGGCGTTCATTGCCGGCTGTTACTCGATTCAGCGGGTAGCAAGCAATT TTTCCGCAGCCCTTATCCCGCAATGATGCGTAATGCAGGTATTGAGGTGGTTGAGGCACTTAAAGTTAATGTATTTCGTA TGTTCTTGCGCCGAATGGATCTGCGCCAACATCGGAAAATTGTGTTAATCGACAACTATGTTGCTTATACCGGCAGTATG AACATGGTAGATCCCCGGTTCTTCAAACAAGATGCCGGGGTTGGTCAGTGGATTGATATGATGGCGCGCATGGAAGGCCC GGTAGCCACAACCCTAGGTATTGTTTATGCCTGTGACTGGGAAATTGAAACAGGCAAACGTATTTTACCCCCGCCCCCCG ACGCGAATATTATGCCATTCGAAGAAGAGACTGGTCATACGATTCAAGTCATCGCTTCTGGCCCTGGTTTCCCAGAAGAA ATGATCCACCAGGCATTATTAACAGCTGTGTATGCCGCACGTGAACAGTTAATTATGACTACGCCATATTTTGTCCCCAG TGATGACTTATTACATGCCATCTGTACCGCGGCACAACGCGGGGTTGATGTCAGTATTATTGTCCCGCGTGAGAATGATT CGATGATGGTTCGCTGGGCCAGCCGAGCATTCTTCACCGAATTGCTGAATGCAGGCGTTAAAATTTATCAGTTTGAAGGC GGCCTATTACACAGTAAAAGTGTTCTGGTCGATGGACAGCTAAGTTTAGTCGGCACTGTTAATCTGGATATGCGCAGTTT GTGGCTGAATTTTGAAATCACACTGGTGATTGATGATGATGGCTTTGGGGCTGATTTAGCACAAGTTCAGGATGATTATA TCGCCCGCTCTGCCTTATTGGATGGTGAACGGTGGAACAAGCGCCCTCTTTGGCACCGAGTAACTGAGCGTTTATTCTAT TTTTTCAGCCCATTACTGTAA
Upstream 100 bases:
>100_bases AAAAGATTTTATACATCAATATAACCGATTAAAGGTTTCACCTTCTCGATACTGTGCGTACACTCTTTAGTGACCGTTTG TGAACAGGATTTACGCCCTT
Downstream 100 bases:
>100_bases AAAACCGAAGAATTCATGACCACGAAATTGCAGATTATCTGAATGAGCGGTATTGGGCAGGATAAAAATTGTAAAAACCC TAGCGAGAATGTTTTAATTA
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTTFYTVISWLSVFGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGELHLGKRRAERAKAMWPSTAR WLSELKECQHIFANSNSEVASPLFQLCERRQGINGVKGNQLQLLTTTDDTLKALVRDIELARHNIEMVFYIWQPGGLVDQ VAESLMAAARRGVHCRLLLDSAGSKQFFRSPYPAMMRNAGIEVVEALKVNVFRMFLRRMDLRQHRKIVLIDNYVAYTGSM NMVDPRFFKQDAGVGQWIDMMARMEGPVATTLGIVYACDWEIETGKRILPPPPDANIMPFEEETGHTIQVIASGPGFPEE MIHQALLTAVYAAREQLIMTTPYFVPSDDLLHAICTAAQRGVDVSIIVPRENDSMMVRWASRAFFTELLNAGVKIYQFEG GLLHSKSVLVDGQLSLVGTVNLDMRSLWLNFEITLVIDDDGFGADLAQVQDDYIARSALLDGERWNKRPLWHRVTERLFY FFSPLL
Sequences:
>Translated_486_residues MTTFYTVISWLSVFGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGELHLGKRRAERAKAMWPSTAR WLSELKECQHIFANSNSEVASPLFQLCERRQGINGVKGNQLQLLTTTDDTLKALVRDIELARHNIEMVFYIWQPGGLVDQ VAESLMAAARRGVHCRLLLDSAGSKQFFRSPYPAMMRNAGIEVVEALKVNVFRMFLRRMDLRQHRKIVLIDNYVAYTGSM NMVDPRFFKQDAGVGQWIDMMARMEGPVATTLGIVYACDWEIETGKRILPPPPDANIMPFEEETGHTIQVIASGPGFPEE MIHQALLTAVYAAREQLIMTTPYFVPSDDLLHAICTAAQRGVDVSIIVPRENDSMMVRWASRAFFTELLNAGVKIYQFEG GLLHSKSVLVDGQLSLVGTVNLDMRSLWLNFEITLVIDDDGFGADLAQVQDDYIARSALLDGERWNKRPLWHRVTERLFY FFSPLL >Mature_485_residues TTFYTVISWLSVFGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGELHLGKRRAERAKAMWPSTARW LSELKECQHIFANSNSEVASPLFQLCERRQGINGVKGNQLQLLTTTDDTLKALVRDIELARHNIEMVFYIWQPGGLVDQV AESLMAAARRGVHCRLLLDSAGSKQFFRSPYPAMMRNAGIEVVEALKVNVFRMFLRRMDLRQHRKIVLIDNYVAYTGSMN MVDPRFFKQDAGVGQWIDMMARMEGPVATTLGIVYACDWEIETGKRILPPPPDANIMPFEEETGHTIQVIASGPGFPEEM IHQALLTAVYAAREQLIMTTPYFVPSDDLLHAICTAAQRGVDVSIIVPRENDSMMVRWASRAFFTELLNAGVKIYQFEGG LLHSKSVLVDGQLSLVGTVNLDMRSLWLNFEITLVIDDDGFGADLAQVQDDYIARSALLDGERWNKRPLWHRVTERLFYF FSPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=486, Percent_Identity=83.5390946502058, Blast_Score=875, Evalue=0.0, Organism=Escherichia coli, GI1787007, Length=392, Percent_Identity=27.0408163265306, Blast_Score=115, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 55128; Mature: 54997
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFYTVISWLSVFGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCH LHLGKRRAERAKAMWPSTARWLSELKECQHIFANSNSEVASPLFQLCERRQGINGVKGNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCE LQLLTTTDDTLKALVRDIELARHNIEMVFYIWQPGGLVDQVAESLMAAARRGVHCRLLLD EEEEECCCHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEE SAGSKQFFRSPYPAMMRNAGIEVVEALKVNVFRMFLRRMDLRQHRKIVLIDNYVAYTGSM CCCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECEEEEECCC NMVDPRFFKQDAGVGQWIDMMARMEGPVATTLGIVYACDWEIETGKRILPPPPDANIMPF CCCCCHHHHHCCCCHHHHHHHHHCCCCHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCC EEETGHTIQVIASGPGFPEEMIHQALLTAVYAAREQLIMTTPYFVPSDDLLHAICTAAQR CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHC GVDVSIIVPRENDSMMVRWASRAFFTELLNAGVKIYQFEGGLLHSKSVLVDGQLSLVGTV CCEEEEEEECCCCCEEEEHHHHHHHHHHHHCCEEEEEECCCEEECCEEEECCCEEEEEEE NLDMRSLWLNFEITLVIDDDGFGADLAQVQDDYIARSALLDGERWNKRPLWHRVTERLFY CCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH FFSPLL HHHCCC >Mature Secondary Structure TTFYTVISWLSVFGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCH LHLGKRRAERAKAMWPSTARWLSELKECQHIFANSNSEVASPLFQLCERRQGINGVKGNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCE LQLLTTTDDTLKALVRDIELARHNIEMVFYIWQPGGLVDQVAESLMAAARRGVHCRLLLD EEEEECCCHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEE SAGSKQFFRSPYPAMMRNAGIEVVEALKVNVFRMFLRRMDLRQHRKIVLIDNYVAYTGSM CCCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECEEEEECCC NMVDPRFFKQDAGVGQWIDMMARMEGPVATTLGIVYACDWEIETGKRILPPPPDANIMPF CCCCCHHHHHCCCCHHHHHHHHHCCCCHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCC EEETGHTIQVIASGPGFPEEMIHQALLTAVYAAREQLIMTTPYFVPSDDLLHAICTAAQR CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHC GVDVSIIVPRENDSMMVRWASRAFFTELLNAGVKIYQFEGGLLHSKSVLVDGQLSLVGTV CCEEEEEEECCCCCEEEEHHHHHHHHHHHHCCEEEEEECCCEEECCEEEECCCEEEEEEE NLDMRSLWLNFEITLVIDDDGFGADLAQVQDDYIARSALLDGERWNKRPLWHRVTERLFY CCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH FFSPLL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA