| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950140
Identifier: 153950140
GI number: 153950140
Start: 2723884
End: 2724993
Strand: Reverse
Name: 153950140
Synonym: YpsIP31758_2419
Alternate gene names: NA
Gene position: 2724993-2723884 (Counterclockwise)
Preceding gene: 153950631
Following gene: 153950564
Centisome position: 57.69
GC content: 42.07
Gene sequence:
>1110_bases TTGAAAAAGATTTTATTAACCGGTGCAACAGGTTTTCTAGGCGGAGCTGTACTAGAAAAATTATTGTTGGCAAATTCAGA TTTTAATTATTTATTACTGGTGCGAGCCAATACACTAGAACAAGGTTTAATGCGTATTCGCAAGAATCTGGAGAAGTTTT ATCTGCCAAATGAGCTGATTAATAAAATAAATATTAACCACATATTATTAGGTGACTTGGCTGAGCCGGATAGTTTTATT AATGATGTGCGTATTGATGACGTCACTCATGTTATTAACTGTGCGGCTATCGCTTCATTCGGTAATAATCCGTTGATTTG GAAAGTGAATGTTGAGGGTACCTTAGCCTTCGGCAAGAGAATGGCACAGGTCGCTGGTTTACAACGTTTTGTTCATGTTG GAACGGCGATGGCCTGTACGCCAGAGGCCGATACTGTGGTTGATGAACGGGTATTGTCCACTGAGAATGATGCTCATTTA GTGGAATACACTAAATCCAAATCAGCTATTGAATGCCTATTGGCCGAACACTGCCCAACATTACCACTGGTCTTTGCCCG GCCCTCCATTGTTGTTGGGCATACTCGCTTGGGATGCCAGCCTTCCAGCAGTATTTTTTGGGTATTTCGCATGGCATTAA TGCTGCGGAAATTCATGTGTTCATTAGATGACCATATTGATGTTATTCCCGTTGATTATTGTGCTGATGCGCTGCTTTAT ATCTTGGAATACCCAAATTTACCGGATAATATTTATCATATTTCTGCTGGAGAAAAAGGCAGCGTCAGTTTCTCGGAAAT TGATCAGGCGATGTCAGTAGCTGCCAAACAAAAACCCGTGGGTGTTAATTATAGCCAAGTAGAATATACGGCGTTGGTGC AGATGCGTAATCAACTGAAAGGTATTTTTGGCCCTTGCAATGAACGGTTAATGTTGAAAGCGATGCGGCTATATGGCTCT TTTGCCATGTTAAATGTGCGTTTTAGTAATGAGCGCTTGTTGAGTTTGGGGATGCCGCGCACGCCGCGCTTTACCGATTA TATTGCCCGCTGTGTGGAATCTAGCCACGGGATGACTATCCAGCAACAAATGGCTGTCGATTTTAAATAA
Upstream 100 bases:
>100_bases CTATTTCAACTAAAACCTATCGATCTGGCTAATATTTACCTGCCGTTTACTCAGTGATCCATACAATCCGTTGACTAAAA ATAAGACAGGATCAGAGACG
Downstream 100 bases:
>100_bases TTCAAGGCGCTACGGGTCACGTTGGGCCTGATTGCGTTTTATCTTGAATCGTATCCTGATCTTAAACCGTTCTCTTTCAC TCCGATGCTAACGGTGATAC
Product: NAD dependent epimerase/dehydratase family protein
Products: NA
Alternate protein names: Male Sterility Domain; Male Sterility Domain Protein; UDP-Glucose 4-Epimerase; Hemolysin F; Male Sterility Domain-Containing Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Hemolysin HlyF; L-Aminoadipate-Semialdehyde Dehydrogenase Large Subunit
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKKILLTGATGFLGGAVLEKLLLANSDFNYLLLVRANTLEQGLMRIRKNLEKFYLPNELINKININHILLGDLAEPDSFI NDVRIDDVTHVINCAAIASFGNNPLIWKVNVEGTLAFGKRMAQVAGLQRFVHVGTAMACTPEADTVVDERVLSTENDAHL VEYTKSKSAIECLLAEHCPTLPLVFARPSIVVGHTRLGCQPSSSIFWVFRMALMLRKFMCSLDDHIDVIPVDYCADALLY ILEYPNLPDNIYHISAGEKGSVSFSEIDQAMSVAAKQKPVGVNYSQVEYTALVQMRNQLKGIFGPCNERLMLKAMRLYGS FAMLNVRFSNERLLSLGMPRTPRFTDYIARCVESSHGMTIQQQMAVDFK
Sequences:
>Translated_369_residues MKKILLTGATGFLGGAVLEKLLLANSDFNYLLLVRANTLEQGLMRIRKNLEKFYLPNELINKININHILLGDLAEPDSFI NDVRIDDVTHVINCAAIASFGNNPLIWKVNVEGTLAFGKRMAQVAGLQRFVHVGTAMACTPEADTVVDERVLSTENDAHL VEYTKSKSAIECLLAEHCPTLPLVFARPSIVVGHTRLGCQPSSSIFWVFRMALMLRKFMCSLDDHIDVIPVDYCADALLY ILEYPNLPDNIYHISAGEKGSVSFSEIDQAMSVAAKQKPVGVNYSQVEYTALVQMRNQLKGIFGPCNERLMLKAMRLYGS FAMLNVRFSNERLLSLGMPRTPRFTDYIARCVESSHGMTIQQQMAVDFK >Mature_369_residues MKKILLTGATGFLGGAVLEKLLLANSDFNYLLLVRANTLEQGLMRIRKNLEKFYLPNELINKININHILLGDLAEPDSFI NDVRIDDVTHVINCAAIASFGNNPLIWKVNVEGTLAFGKRMAQVAGLQRFVHVGTAMACTPEADTVVDERVLSTENDAHL VEYTKSKSAIECLLAEHCPTLPLVFARPSIVVGHTRLGCQPSSSIFWVFRMALMLRKFMCSLDDHIDVIPVDYCADALLY ILEYPNLPDNIYHISAGEKGSVSFSEIDQAMSVAAKQKPVGVNYSQVEYTALVQMRNQLKGIFGPCNERLMLKAMRLYGS FAMLNVRFSNERLLSLGMPRTPRFTDYIARCVESSHGMTIQQQMAVDFK
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI28572084, Length=281, Percent_Identity=28.4697508896797, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24649464, Length=281, Percent_Identity=28.4697508896797, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41201; Mature: 41201
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLTGATGFLGGAVLEKLLLANSDFNYLLLVRANTLEQGLMRIRKNLEKFYLPNELI CCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHH NKININHILLGDLAEPDSFINDVRIDDVTHVINCAAIASFGNNPLIWKVNVEGTLAFGKR HHCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEHHHHHH MAQVAGLQRFVHVGTAMACTPEADTVVDERVLSTENDAHLVEYTKSKSAIECLLAEHCPT HHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCC LPLVFARPSIVVGHTRLGCQPSSSIFWVFRMALMLRKFMCSLDDHIDVIPVDYCADALLY CCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH ILEYPNLPDNIYHISAGEKGSVSFSEIDQAMSVAAKQKPVGVNYSQVEYTALVQMRNQLK HHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH GIFGPCNERLMLKAMRLYGSFAMLNVRFSNERLLSLGMPRTPRFTDYIARCVESSHGMTI HCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHCCCCCEE QQQMAVDFK EHHHCCCCC >Mature Secondary Structure MKKILLTGATGFLGGAVLEKLLLANSDFNYLLLVRANTLEQGLMRIRKNLEKFYLPNELI CCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHH NKININHILLGDLAEPDSFINDVRIDDVTHVINCAAIASFGNNPLIWKVNVEGTLAFGKR HHCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEHHHHHH MAQVAGLQRFVHVGTAMACTPEADTVVDERVLSTENDAHLVEYTKSKSAIECLLAEHCPT HHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCC LPLVFARPSIVVGHTRLGCQPSSSIFWVFRMALMLRKFMCSLDDHIDVIPVDYCADALLY CCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH ILEYPNLPDNIYHISAGEKGSVSFSEIDQAMSVAAKQKPVGVNYSQVEYTALVQMRNQLK HHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH GIFGPCNERLMLKAMRLYGSFAMLNVRFSNERLLSLGMPRTPRFTDYIARCVESSHGMTI HCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHCCCCCEE QQQMAVDFK EHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA