| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yhgN [H]
Identifier: 153950077
GI number: 153950077
Start: 4522679
End: 4523263
Strand: Direct
Name: yhgN [H]
Synonym: YpsIP31758_4015
Alternate gene names: 153950077
Gene position: 4522679-4523263 (Clockwise)
Preceding gene: 153949067
Following gene: 153950799
Centisome position: 95.75
GC content: 46.84
Gene sequence:
>585_bases ATGATTGCGGCAACTGTGTTGCTATTTTTAATTATGGATCCATTGGGAAATTTGCCGATTTTTATGTCGGTACTCAAGCA TTTGGAGCCTAAACGGCGACGGGTGGTGTTGATCCGTGAATTACTGATTGCCTTAATTTTGATGCTGATTTTTCTGTTCG CAGGCGAGAAGATTCTGTTATTTCTGAATCTGCGCACCGAAACCGTCTCAATATCCGGCGGTATCATTTTGTTCTTAATC GCTATTAGGATGATTTTCCCTTCCTCCGAGAGCAACGTTACTGGGCTATCTGCTGGGGAAGAGCCGTTTTTGGTGCCACT GGCGATCCCTCTGGTGGCCGGCCCCTCTATTTTGGCCACCCTGATGTTGCTGTCTCATCAATATCCTAATCAGCTCAGCC ATTTGGTGCTGGCATTGATGATTGCCTGGGGCTTATCGGCAGCTATTTTACTGATGTCGAATCTGTTCCTGCGTTTGTTG GGGAGTAAAGGTGTCAGTGCGCTGGAGCGGTTGATGGGGTTAATTTTGGTGATGCTATCGACGCAGATGTTTTTAGATGG TGTGAGGGCGTATTTGGCGATTTGA
Upstream 100 bases:
>100_bases ATTCGATACCAGAATGATTCAAAGAAATTTTTCTAATATGTGACTTTATCTGGCCGAAAATGCCAGTAGCCTTTATCCCT TTGAGGTAATGATGACTGAG
Downstream 100 bases:
>100_bases ACGCACCATTCAAGAGCAGACCGGATTAGGCCTCGGTTGATATTCCTTATTGCGCTCAACGTCAAAAAAACCAATTCAAA ATGGGTCTTTGACTGCTGAC
Product: dITP- and XTP- hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MIAATVLLFLIMDPLGNLPIFMSVLKHLEPKRRRVVLIRELLIALILMLIFLFAGEKILLFLNLRTETVSISGGIILFLI AIRMIFPSSESNVTGLSAGEEPFLVPLAIPLVAGPSILATLMLLSHQYPNQLSHLVLALMIAWGLSAAILLMSNLFLRLL GSKGVSALERLMGLILVMLSTQMFLDGVRAYLAI
Sequences:
>Translated_194_residues MIAATVLLFLIMDPLGNLPIFMSVLKHLEPKRRRVVLIRELLIALILMLIFLFAGEKILLFLNLRTETVSISGGIILFLI AIRMIFPSSESNVTGLSAGEEPFLVPLAIPLVAGPSILATLMLLSHQYPNQLSHLVLALMIAWGLSAAILLMSNLFLRLL GSKGVSALERLMGLILVMLSTQMFLDGVRAYLAI >Mature_194_residues MIAATVLLFLIMDPLGNLPIFMSVLKHLEPKRRRVVLIRELLIALILMLIFLFAGEKILLFLNLRTETVSISGGIILFLI AIRMIFPSSESNVTGLSAGEEPFLVPLAIPLVAGPSILATLMLLSHQYPNQLSHLVLALMIAWGLSAAILLMSNLFLRLL GSKGVSALERLMGLILVMLSTQMFLDGVRAYLAI
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=192, Percent_Identity=77.6041666666667, Blast_Score=299, Evalue=8e-83, Organism=Escherichia coli, GI1787494, Length=197, Percent_Identity=27.9187817258883, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1787809, Length=199, Percent_Identity=26.1306532663317, Blast_Score=67, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 21261; Mature: 21261
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAATVLLFLIMDPLGNLPIFMSVLKHLEPKRRRVVLIRELLIALILMLIFLFAGEKILL CHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE FLNLRTETVSISGGIILFLIAIRMIFPSSESNVTGLSAGEEPFLVPLAIPLVAGPSILAT EEEECCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHCCHHHHHH LMLLSHQYPNQLSHLVLALMIAWGLSAAILLMSNLFLRLLGSKGVSALERLMGLILVMLS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TQMFLDGVRAYLAI HHHHHHHHHHHHCC >Mature Secondary Structure MIAATVLLFLIMDPLGNLPIFMSVLKHLEPKRRRVVLIRELLIALILMLIFLFAGEKILL CHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE FLNLRTETVSISGGIILFLIAIRMIFPSSESNVTGLSAGEEPFLVPLAIPLVAGPSILAT EEEECCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHCCHHHHHH LMLLSHQYPNQLSHLVLALMIAWGLSAAILLMSNLFLRLLGSKGVSALERLMGLILVMLS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TQMFLDGVRAYLAI HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]