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The map label for this gene is yraM [H]

Identifier: 153950065

GI number: 153950065

Start: 551629

End: 553698

Strand: Reverse

Name: yraM [H]

Synonym: YpsIP31758_0475

Alternate gene names: 153950065

Gene position: 553698-551629 (Counterclockwise)

Preceding gene: 153947040

Following gene: 153949549

Centisome position: 11.72

GC content: 50.24

Gene sequence:

>2070_bases
ATGCAGAAATTACTGCTCGATCGTGTTGATTCATTGTTTCATCCGAATTGCCGATTTAATATTGAGCATCTTGAAAAAAA
CATCACTGGATACAGTATGCTTTCCTCAACGTTCGTTCGTTCTAAAGCAGGGCTTGTTCCTGTCATTCTGGCTGCTCTTA
TTTTAGCGGCCTGTACAGGCGATGCGCCACAAACGCCGCCCCCCGTAAATATACAGGACGAAGCAAGCGCTAACTCTGAT
TATTATCTGCAACAGTTGCAGCAGAGCAGTGATGATAACAAGGCTGACTGGCAATTACTTGCCATTCGTGCCCTATTACG
TGAGGCAAAAGTGCCTCAGGCCGCCGAACAACTCAGCACTCTCCCTGCAAACCTGAGCGATACACAGCGCCAGGAACAGC
AATTGCTGGCAGCTGAACTGTTGATCGCGCAGAAAAATACGCCAGCGGCGGCTGATATTCTTGCCAAATTAGAGGCAACT
CAACTCTCAGCTAACCAAAAAGTACGCTACTATCAGGCCCAAATTGCCGCCAATCAGGATAAAGCCACCCTGCCATTAAT
TCGTGCATTTATCGCTCAGGAACCATTACTGACAGATAAAGCCCATCAAGATAATATTGATGGCACTTGGCAGTCACTGT
CCCAACTGACACCACAAGAATTAAATACCATGGTGATCAACGCAGACGAAAATGTGCTGCAAGGCTGGCTGGATTTACTG
CGTGTTTATCAAGATAACAAGCAAGACCCAGAGCTACTGAAAGCCGGGATTAAAGACTGGCAAACCCGTTACCCACAAAA
CCCGGCAGCGAAAAATCTGCCAACTGCATTAACTCAGATCAGTAATTTCAGCCAGGCATCCACCGCCAAGATTGCTCTGC
TGCTGCCATTAAGTGGCCCGGCACAAGTATTCGCCGATGCCATCCAGCAAGGTTTTACTGCCGCCCAAAATGGCTCAGCG
GTAACGGCTTCAGTACCAGTAACGCCAAATGTGACGGAAAGCAGCCCAACGGATACTGCTGCGGTTGTTTCGGATGATAC
CCCGGCCACCCTTCCGGCCCCAGTGACCCCCCCCGTCGTCACCAACGCCCAAGTAAAAATCTACGATACCAACACTCAAC
CACTGGCAGCGCTATTGGCTCAAGCCCAGCAAGATGGTGCAACACTGGTCGTTGGCCCTCTGCTAAAACCCGAAGTTGAG
CAACTCAGTGCCACCCCAAGCACATTGAATATTCTGGCGTTGAACCAACCAGAAGCCAGTAATAACAGCCCAAACATCTG
TTACTTTGCCCTATCGCCAGAAGATGAAGCCCGTGATGCAGCGCATCACCTGTGGGAACAGCAAAAAAGAATGCCGCTGT
TGCTGGTGCCTCGTGGTGCCCTTGGTGAACGCATTGCCAAAGCCTTCGCTGACGAGTGGCAAAAACAAGGTGGGCAAACG
GTATTACAACAGAACTTCGGTTCAACCACTGAGTTGAAGCAATCCATCAACAGTGGTGCCGGTATCCGCCTGACCGGTAC
CCCCGTTAGCGTTTCTAATGTAGCCGCCGCCCCGGCCTCCGTCACTATTGCGGGCCTGACCATTCCAGCACCGCCAATCG
ATGCACCGGTAGTGTCAACGTCTTCGAGCGGTAACATTGATGCGGTCTATATCATTGCGACGCCATCTGAATTAACCCTG
ATTAAGCCAATGATTGATATGGCAACCAGTTCACGCAGTAAACCTGCGCTGTTTGCCAGTTCACGTAGCTACCAGGCTGG
CGCTGGCCCAGATTACCGTCTGGAAATGGAAGGTATACAGTTTAGTGATATTCCGCTGATGGCCGGCTCTAACCCCGCTT
TGCTGCAACAAGCATCGGCTAAATACGCTAACGATTATTCTCTGGTACGCTTATACGCCATGGGGATTGATGCCTGGGCA
TTGGCAAATCATTTTTCTGAAATGCGCCAAATCCCTGGCTTCCAAGTCAAAGGGGTCACCGGTGATTTAACTGCATCATC
AGATTGTGTTATCACCCGCAAGCTACCTTGGTTACAATATCGCCAGGGAATGGTGGTGCCACTCGCATAA

Upstream 100 bases:

>100_bases
TCTTCAGCCGCAATCAAATCAACGCCTTTCAGTACCTCTAACGCCCGGTGGGTAATGTCCCCTAAATTACCGATTGGGGT
AGGTACCACATAAAGCGTAG

Downstream 100 bases:

>100_bases
TTCAGTCACATTCTTCTCATATGTTGTAGAGAATGCTGTCATAGAGAATGATGTGGTAGAAAATATTGTCGAGTGATTAA
GGATTTTAGGGACTATCGAT

Product: LppC lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 689

Protein sequence:

>689_residues
MQKLLLDRVDSLFHPNCRFNIEHLEKNITGYSMLSSTFVRSKAGLVPVILAALILAACTGDAPQTPPPVNIQDEASANSD
YYLQQLQQSSDDNKADWQLLAIRALLREAKVPQAAEQLSTLPANLSDTQRQEQQLLAAELLIAQKNTPAAADILAKLEAT
QLSANQKVRYYQAQIAANQDKATLPLIRAFIAQEPLLTDKAHQDNIDGTWQSLSQLTPQELNTMVINADENVLQGWLDLL
RVYQDNKQDPELLKAGIKDWQTRYPQNPAAKNLPTALTQISNFSQASTAKIALLLPLSGPAQVFADAIQQGFTAAQNGSA
VTASVPVTPNVTESSPTDTAAVVSDDTPATLPAPVTPPVVTNAQVKIYDTNTQPLAALLAQAQQDGATLVVGPLLKPEVE
QLSATPSTLNILALNQPEASNNSPNICYFALSPEDEARDAAHHLWEQQKRMPLLLVPRGALGERIAKAFADEWQKQGGQT
VLQQNFGSTTELKQSINSGAGIRLTGTPVSVSNVAAAPASVTIAGLTIPAPPIDAPVVSTSSSGNIDAVYIIATPSELTL
IKPMIDMATSSRSKPALFASSRSYQAGAGPDYRLEMEGIQFSDIPLMAGSNPALLQQASAKYANDYSLVRLYAMGIDAWA
LANHFSEMRQIPGFQVKGVTGDLTASSDCVITRKLPWLQYRQGMVVPLA

Sequences:

>Translated_689_residues
MQKLLLDRVDSLFHPNCRFNIEHLEKNITGYSMLSSTFVRSKAGLVPVILAALILAACTGDAPQTPPPVNIQDEASANSD
YYLQQLQQSSDDNKADWQLLAIRALLREAKVPQAAEQLSTLPANLSDTQRQEQQLLAAELLIAQKNTPAAADILAKLEAT
QLSANQKVRYYQAQIAANQDKATLPLIRAFIAQEPLLTDKAHQDNIDGTWQSLSQLTPQELNTMVINADENVLQGWLDLL
RVYQDNKQDPELLKAGIKDWQTRYPQNPAAKNLPTALTQISNFSQASTAKIALLLPLSGPAQVFADAIQQGFTAAQNGSA
VTASVPVTPNVTESSPTDTAAVVSDDTPATLPAPVTPPVVTNAQVKIYDTNTQPLAALLAQAQQDGATLVVGPLLKPEVE
QLSATPSTLNILALNQPEASNNSPNICYFALSPEDEARDAAHHLWEQQKRMPLLLVPRGALGERIAKAFADEWQKQGGQT
VLQQNFGSTTELKQSINSGAGIRLTGTPVSVSNVAAAPASVTIAGLTIPAPPIDAPVVSTSSSGNIDAVYIIATPSELTL
IKPMIDMATSSRSKPALFASSRSYQAGAGPDYRLEMEGIQFSDIPLMAGSNPALLQQASAKYANDYSLVRLYAMGIDAWA
LANHFSEMRQIPGFQVKGVTGDLTASSDCVITRKLPWLQYRQGMVVPLA
>Mature_689_residues
MQKLLLDRVDSLFHPNCRFNIEHLEKNITGYSMLSSTFVRSKAGLVPVILAALILAACTGDAPQTPPPVNIQDEASANSD
YYLQQLQQSSDDNKADWQLLAIRALLREAKVPQAAEQLSTLPANLSDTQRQEQQLLAAELLIAQKNTPAAADILAKLEAT
QLSANQKVRYYQAQIAANQDKATLPLIRAFIAQEPLLTDKAHQDNIDGTWQSLSQLTPQELNTMVINADENVLQGWLDLL
RVYQDNKQDPELLKAGIKDWQTRYPQNPAAKNLPTALTQISNFSQASTAKIALLLPLSGPAQVFADAIQQGFTAAQNGSA
VTASVPVTPNVTESSPTDTAAVVSDDTPATLPAPVTPPVVTNAQVKIYDTNTQPLAALLAQAQQDGATLVVGPLLKPEVE
QLSATPSTLNILALNQPEASNNSPNICYFALSPEDEARDAAHHLWEQQKRMPLLLVPRGALGERIAKAFADEWQKQGGQT
VLQQNFGSTTELKQSINSGAGIRLTGTPVSVSNVAAAPASVTIAGLTIPAPPIDAPVVSTSSSGNIDAVYIIATPSELTL
IKPMIDMATSSRSKPALFASSRSYQAGAGPDYRLEMEGIQFSDIPLMAGSNPALLQQASAKYANDYSLVRLYAMGIDAWA
LANHFSEMRQIPGFQVKGVTGDLTASSDCVITRKLPWLQYRQGMVVPLA

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1655 [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=683, Percent_Identity=53.0014641288433, Blast_Score=697, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 74031; Mature: 74031

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLLLDRVDSLFHPNCRFNIEHLEKNITGYSMLSSTFVRSKAGLVPVILAALILAACTG
CCHHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
DAPQTPPPVNIQDEASANSDYYLQQLQQSSDDNKADWQLLAIRALLREAKVPQAAEQLST
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
LPANLSDTQRQEQQLLAAELLIAQKNTPAAADILAKLEATQLSANQKVRYYQAQIAANQD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCC
KATLPLIRAFIAQEPLLTDKAHQDNIDGTWQSLSQLTPQELNTMVINADENVLQGWLDLL
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCEEEEECCHHHHHHHHHHH
RVYQDNKQDPELLKAGIKDWQTRYPQNPAAKNLPTALTQISNFSQASTAKIALLLPLSGP
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCH
AQVFADAIQQGFTAAQNGSAVTASVPVTPNVTESSPTDTAAVVSDDTPATLPAPVTPPVV
HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
TNAQVKIYDTNTQPLAALLAQAQQDGATLVVGPLLKPEVEQLSATPSTLNILALNQPEAS
CCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCC
NNSPNICYFALSPEDEARDAAHHLWEQQKRMPLLLVPRGALGERIAKAFADEWQKQGGQT
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCHH
VLQQNFGSTTELKQSINSGAGIRLTGTPVSVSNVAAAPASVTIAGLTIPAPPIDAPVVST
HHHHCCCCHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCEEEEEEEECCCCCCCCCEEEC
SSSGNIDAVYIIATPSELTLIKPMIDMATSSRSKPALFASSRSYQAGAGPDYRLEMEGIQ
CCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCE
FSDIPLMAGSNPALLQQASAKYANDYSLVRLYAMGIDAWALANHFSEMRQIPGFQVKGVT
ECCCEEECCCCHHHHHHHHHHHCCCHHEEEHEECCCHHHHHHHHHHHHHHCCCEEEECCC
GDLTASSDCVITRKLPWLQYRQGMVVPLA
CCCCCCCCEEEEECCCHHHHHCCEEEECC
>Mature Secondary Structure
MQKLLLDRVDSLFHPNCRFNIEHLEKNITGYSMLSSTFVRSKAGLVPVILAALILAACTG
CCHHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
DAPQTPPPVNIQDEASANSDYYLQQLQQSSDDNKADWQLLAIRALLREAKVPQAAEQLST
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
LPANLSDTQRQEQQLLAAELLIAQKNTPAAADILAKLEATQLSANQKVRYYQAQIAANQD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCC
KATLPLIRAFIAQEPLLTDKAHQDNIDGTWQSLSQLTPQELNTMVINADENVLQGWLDLL
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCEEEEECCHHHHHHHHHHH
RVYQDNKQDPELLKAGIKDWQTRYPQNPAAKNLPTALTQISNFSQASTAKIALLLPLSGP
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCH
AQVFADAIQQGFTAAQNGSAVTASVPVTPNVTESSPTDTAAVVSDDTPATLPAPVTPPVV
HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
TNAQVKIYDTNTQPLAALLAQAQQDGATLVVGPLLKPEVEQLSATPSTLNILALNQPEAS
CCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCC
NNSPNICYFALSPEDEARDAAHHLWEQQKRMPLLLVPRGALGERIAKAFADEWQKQGGQT
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCHH
VLQQNFGSTTELKQSINSGAGIRLTGTPVSVSNVAAAPASVTIAGLTIPAPPIDAPVVST
HHHHCCCCHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCEEEEEEEECCCCCCCCCEEEC
SSSGNIDAVYIIATPSELTLIKPMIDMATSSRSKPALFASSRSYQAGAGPDYRLEMEGIQ
CCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCE
FSDIPLMAGSNPALLQQASAKYANDYSLVRLYAMGIDAWALANHFSEMRQIPGFQVKGVT
ECCCEEECCCCHHHHHHHHHHHCCCHHEEEHEECCCHHHHHHHHHHHHHHCCCEEEECCC
GDLTASSDCVITRKLPWLQYRQGMVVPLA
CCCCCCCCEEEEECCCHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]