| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949992
Identifier: 153949992
GI number: 153949992
Start: 3570984
End: 3571730
Strand: Reverse
Name: 153949992
Synonym: YpsIP31758_3172
Alternate gene names: NA
Gene position: 3571730-3570984 (Counterclockwise)
Preceding gene: 153948402
Following gene: 153950699
Centisome position: 75.62
GC content: 50.33
Gene sequence:
>747_bases ATGCTGAAATGGCAGGCCACAACTGCATGTGAGGATCCCGCGGAGGGGGAAGAACTTCATCGCTTGGTTGCCGATATCCC GATCGGCATTTTACAGCACATCACATTGAGGCGGCAGTTTTGGCGAACTGCCTGCGCTATCTATTTATTGGGATGTGGTT TTAGCTTATCTGATGTTAGTAACCGCATGTTATGGGATGAGAATCTCATCGATAAAAATGTGCGCGCCACTTTACAGCGA TTACTCGGGGCGCAGGGTTTGCGCCTGTTGTTGATGGGGCGCATTACGCAATCGGAAATCAGCCAAATATTACGGCAGAC GGCACTTAGGCTGCTCTATTTCAGCCACTATTATGAATCAGATGCTGTCGCCAGTTATTTACAACAGGGGCAGTCGTTAC TCTCGGCGAGCGCCCAGTGCTCACCCTGTGAGTTGTTCCAAGGGCGAATTTCCCCAGGAGAGGTCGATGAGGTGCAATTG ACGCTATTAATGGATATTGCCAAAGTGACTAAAATCTCGCTGCGGGCGGCACTGCACCGGCATCTGGTTGAAGGGGCTAC GGAGGAGTGGGTCTGTTCAGTGTATAAGATGAACCAAGAGGATTTCTGGCAGAACATGCGTAAATTACATCGTCTAAATG AGCGGGTAGTGCAATTACTGCCGTTTTATACTCGTCAGACTTCAAGTTGCATGTGCGTGGGCTGCCCTCGCTCACCCCAG CCACTTACTGATGTAAGCTCCTCGTGA
Upstream 100 bases:
>100_bases CAAATTCAACCCGATAATGTGCTGTTTACCGGTAAACCCGAGCAATTCGGGCAGATCGTTCGTGCCTTGCTGGATCACGG CCATCAGGATGTGAATTAGT
Downstream 100 bases:
>100_bases TGCACTGAGTTGCCGCCTTCCTGCAACTCAAATTATTTTGGGCATATTCATCAGATGACCAGATGAAATAATCGCTGAAT TAAGTATTTTTTTATTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MLKWQATTACEDPAEGEELHRLVADIPIGILQHITLRRQFWRTACAIYLLGCGFSLSDVSNRMLWDENLIDKNVRATLQR LLGAQGLRLLLMGRITQSEISQILRQTALRLLYFSHYYESDAVASYLQQGQSLLSASAQCSPCELFQGRISPGEVDEVQL TLLMDIAKVTKISLRAALHRHLVEGATEEWVCSVYKMNQEDFWQNMRKLHRLNERVVQLLPFYTRQTSSCMCVGCPRSPQ PLTDVSSS
Sequences:
>Translated_248_residues MLKWQATTACEDPAEGEELHRLVADIPIGILQHITLRRQFWRTACAIYLLGCGFSLSDVSNRMLWDENLIDKNVRATLQR LLGAQGLRLLLMGRITQSEISQILRQTALRLLYFSHYYESDAVASYLQQGQSLLSASAQCSPCELFQGRISPGEVDEVQL TLLMDIAKVTKISLRAALHRHLVEGATEEWVCSVYKMNQEDFWQNMRKLHRLNERVVQLLPFYTRQTSSCMCVGCPRSPQ PLTDVSSS >Mature_248_residues MLKWQATTACEDPAEGEELHRLVADIPIGILQHITLRRQFWRTACAIYLLGCGFSLSDVSNRMLWDENLIDKNVRATLQR LLGAQGLRLLLMGRITQSEISQILRQTALRLLYFSHYYESDAVASYLQQGQSLLSASAQCSPCELFQGRISPGEVDEVQL TLLMDIAKVTKISLRAALHRHLVEGATEEWVCSVYKMNQEDFWQNMRKLHRLNERVVQLLPFYTRQTSSCMCVGCPRSPQ PLTDVSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28220; Mature: 28220
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKWQATTACEDPAEGEELHRLVADIPIGILQHITLRRQFWRTACAIYLLGCGFSLSDVS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH NRMLWDENLIDKNVRATLQRLLGAQGLRLLLMGRITQSEISQILRQTALRLLYFSHYYES HHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCH DAVASYLQQGQSLLSASAQCSPCELFQGRISPGEVDEVQLTLLMDIAKVTKISLRAALHR HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HLVEGATEEWVCSVYKMNQEDFWQNMRKLHRLNERVVQLLPFYTRQTSSCMCVGCPRSPQ HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC PLTDVSSS CCCCCCCC >Mature Secondary Structure MLKWQATTACEDPAEGEELHRLVADIPIGILQHITLRRQFWRTACAIYLLGCGFSLSDVS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH NRMLWDENLIDKNVRATLQRLLGAQGLRLLLMGRITQSEISQILRQTALRLLYFSHYYES HHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCH DAVASYLQQGQSLLSASAQCSPCELFQGRISPGEVDEVQLTLLMDIAKVTKISLRAALHR HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HLVEGATEEWVCSVYKMNQEDFWQNMRKLHRLNERVVQLLPFYTRQTSSCMCVGCPRSPQ HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC PLTDVSSS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA