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The map label for this gene is 153949953

Identifier: 153949953

GI number: 153949953

Start: 1567170

End: 1567571

Strand: Direct

Name: 153949953

Synonym: YpsIP31758_1338

Alternate gene names: NA

Gene position: 1567170-1567571 (Clockwise)

Preceding gene: 153949463

Following gene: 153950519

Centisome position: 33.18

GC content: 44.28

Gene sequence:

>402_bases
ATGGCAACCCGCGCAATAAACCTTAATGAGTATGGATACTGCAAGATGAAATTACTGAAGAAAATATCGTTGTTGCTGGC
CGTCGCCGTTTTAGCGGGCTGCGTGACTGCACCTAAGCCTATTTATAATTGGGATAATTATCAGTCAACGATTTATGAAT
ATTACAAATCGAATGAAACGCCTGAGCAGCAAATTGCGGCACTGAAAGAAAATATTGAGAAGTCACAAGCTAAAGGTTTG
CCAGTCCCCCCTGGCTTGCACGCGCATCTGGGGATGCTGTATGCCAACACCGGTCATCCGGAATTAGCCATGGCTGAATT
TAACACGGAGAAAGCCACTTTCCCTGAGTCTGCTCCGTTTATGGATTTCTTAATGAGCAAGGATAAAGGGGCATTTAAAT
GA

Upstream 100 bases:

>100_bases
GTGGTACTGCCAGTTACGATTCGACGCTGAATGGCAAAGTGCTGGATTTAGCAATTCGTGAAGCCGTGAACAACTTGGTC
GCAGGTATTGAATCTGGTGC

Downstream 100 bases:

>100_bases
AATCTATTTTCGCCGTATGTGCTGTCATGATGGCGTTGCTACTGACTGGGTGCGCCACGCCAGTCGCGATGGATTACACT
GACTTTAAGCAAAGTAAACC

Product: lipoprotein

Products: NA

Alternate protein names: Periplasmic Protein; TPR Repeat Domain Protein

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MATRAINLNEYGYCKMKLLKKISLLLAVAVLAGCVTAPKPIYNWDNYQSTIYEYYKSNETPEQQIAALKENIEKSQAKGL
PVPPGLHAHLGMLYANTGHPELAMAEFNTEKATFPESAPFMDFLMSKDKGAFK

Sequences:

>Translated_133_residues
MATRAINLNEYGYCKMKLLKKISLLLAVAVLAGCVTAPKPIYNWDNYQSTIYEYYKSNETPEQQIAALKENIEKSQAKGL
PVPPGLHAHLGMLYANTGHPELAMAEFNTEKATFPESAPFMDFLMSKDKGAFK
>Mature_132_residues
ATRAINLNEYGYCKMKLLKKISLLLAVAVLAGCVTAPKPIYNWDNYQSTIYEYYKSNETPEQQIAALKENIEKSQAKGLP
VPPGLHAHLGMLYANTGHPELAMAEFNTEKATFPESAPFMDFLMSKDKGAFK

Specific function: Unknown

COG id: COG4259

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14835; Mature: 14704

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRAINLNEYGYCKMKLLKKISLLLAVAVLAGCVTAPKPIYNWDNYQSTIYEYYKSNET
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
PEQQIAALKENIEKSQAKGLPVPPGLHAHLGMLYANTGHPELAMAEFNTEKATFPESAPF
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCEEEECCCCCCCCCCCCCHH
MDFLMSKDKGAFK
HHHHHHCCCCCCC
>Mature Secondary Structure 
ATRAINLNEYGYCKMKLLKKISLLLAVAVLAGCVTAPKPIYNWDNYQSTIYEYYKSNET
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
PEQQIAALKENIEKSQAKGLPVPPGLHAHLGMLYANTGHPELAMAEFNTEKATFPESAPF
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCEEEECCCCCCCCCCCCCHH
MDFLMSKDKGAFK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA