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The map label for this gene is ureF [H]

Identifier: 153949916

GI number: 153949916

Start: 1285272

End: 1285958

Strand: Direct

Name: ureF [H]

Synonym: YpsIP31758_1081

Alternate gene names: 153949916

Gene position: 1285272-1285958 (Clockwise)

Preceding gene: 153947550

Following gene: 153947853

Centisome position: 27.21

GC content: 49.34

Gene sequence:

>687_bases
ATGAACGCATCAGATCTCATTCGTATCATGCAATTTGGTGATTCCGTACTGCCGGTCGGGGCCTTTACGTTTTCCAATGG
CGTGGAATCTGCCATTCAAACCGGCATCGTTCATGATGTAGCAACATTGAAAGGCTTCGTTTTGACAGCGTTGAAGCAGG
CGGCCAGTTGTGATGGCATGGGCGTTGTCGCGGCTCATCGTGCTGTTGTGGCGGATGACCGTGACGGTATTATCCGTGCT
GACTGGGCGGTTAATAATCGTAAGTTAAATGAAGAAAGCCGCCTGATGGCAACCCGCATGGGTAAAAAGCTGGCAGAAAT
GTCGATCCATGTGGTGGAGCACCCATTGATCAGCTGGTGGTTGGAACAAATCAAAAATGGCAACACGGCGGGCACCTATC
CGGTGACTCAAGCGGTGGTTATGGCAGCACAAGGGATCGGGCAGCGGGAAGTGGTTGTGATGCATCAATACGGTGTGGCG
ATGACCATTTTAAGTGCGGCAATGCGCTTGATGCGCGTTACGCATTTCGATACACAACATATCTTATTTGAACTGAACCA
TGACATTGAGAAATTCTGCGATATTGCCGAGATCGGCGATATTAACCAGATGTCTTCTTATGTCCCGATTGTGGATGTTT
TGGCCGCCGTACATGTGAAAGCCCATATTCGCCTCTTTAGTAACTGA

Upstream 100 bases:

>100_bases
AGAAGGCCACAGTCATGGTGATCACGATCATGACCACAGCCATAGCCATGGTGATCATGACCACGACCATAAACACTGAT
TCAGGCAGCGAGGCACCGCG

Downstream 100 bases:

>100_bases
GTGGCCGCGGTGTGAACGATCGATACATGAATAATGCATCGATAAAAATGAATTCAGGGTACTGCGGTGAGGTGTTAGCC
GAGTACATACCCAAATCAGA

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGMGVVAAHRAVVADDRDGIIRA
DWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWWLEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVA
MTILSAAMRLMRVTHFDTQHILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHIRLFSN

Sequences:

>Translated_228_residues
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGMGVVAAHRAVVADDRDGIIRA
DWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWWLEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVA
MTILSAAMRLMRVTHFDTQHILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHIRLFSN
>Mature_228_residues
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGMGVVAAHRAVVADDRDGIIRA
DWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWWLEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVA
MTILSAAMRLMRVTHFDTQHILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHIRLFSN

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 25023; Mature: 25023

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGM
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GVVAAHRAVVADDRDGIIRADWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWW
CHHHHHHHHEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVAMTILSAAMRLMRVTHFDTQH
HHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHH
ILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHIRLFSN
HHHHHCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MNASDLIRIMQFGDSVLPVGAFTFSNGVESAIQTGIVHDVATLKGFVLTALKQAASCDGM
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GVVAAHRAVVADDRDGIIRADWAVNNRKLNEESRLMATRMGKKLAEMSIHVVEHPLISWW
CHHHHHHHHEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQIKNGNTAGTYPVTQAVVMAAQGIGQREVVVMHQYGVAMTILSAAMRLMRVTHFDTQH
HHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHH
ILFELNHDIEKFCDIAEIGDINQMSSYVPIVDVLAAVHVKAHIRLFSN
HHHHHCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA