| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is sfsA
Identifier: 153949908
GI number: 153949908
Start: 3754498
End: 3755253
Strand: Direct
Name: sfsA
Synonym: YpsIP31758_3337
Alternate gene names: 153949908
Gene position: 3754498-3755253 (Clockwise)
Preceding gene: 153949525
Following gene: 153946903
Centisome position: 79.49
GC content: 45.9
Gene sequence:
>756_bases ATGCCTGCTAACGCCCCGTTACTGCAATTTACCCCCCCGTTACAACCCGCCACACTTATTCTGCGGTACAAACGCTTTTT AGCTGATATTGTGACGCCCGCTGGAGAGGCGCTGACTATTCATTGCGCGAATACTGGAGCAATGACGGGTTGTGCTACGC CTGGAGATACCATCTGGTATTCAACATCAGATAATCCGAAACGGAAGTATCCTCAGAGCTGGGAGCTGACACAGACCCAA ACCGGTGATTGGATTTGTGTCAATACGATGCGCGCCAATGAGTTAGTGAACTTGGCAATTGAAAAAAATCAGATTGCTGA ATTATCTGGTTACAATTTTGTCAGAAAAGAAGTTAAGTATGGCGAAGAGAACAGCCGTATAGACTTGTTATTGCAGGCAG AAGATAGACGTGACTGCTATATTGAAGTCAAATCAGTCACCTTATTACAACAACAGTGTGGTTATTTTCCAGATGCGGTT ACTCTAAGGGGCCAGAAGCATCTTCGGGAATTACAAAACAGGGTTGTCAACGGCCACCGGGCAGTACTTTTCTTTGCGGT ATTGCATACGGGAATCAAACAAGTTGCACCAGCCCGACACATTGATCGTCGCTATGCAGAGTTGCTAGTCCAGGCTCAGC AGGCAGGAGTAGAGGTTATTTGTTATGGTTTTCAACTATCGCCTGACGGTATCGCGCTAAACACCCGTTTACCGTTATTA CTGGACGAAATGCTTTCATCAGAAAACGCTGAATAA
Upstream 100 bases:
>100_bases GCGGACCATTTCTCGCTGTATGAATCGGTCTTCGCGCGGGGCCGCACCCGCTATAACATCGTACAAAGCTGGCCGCTGGC TGGCAGTGAAAGGAAACCAG
Downstream 100 bases:
>100_bases AAAAGCAATTACTGGGTAAAGTGGCTCGCCAAATACGCCTTCCTTCACACCATTGTCAAGCAGGCGACAGGAATAATTGC CAACCTACCTCCCTTCTGTT
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MPANAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTIHCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQ TGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENSRIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAV TLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARHIDRRYAELLVQAQQAGVEVICYGFQLSPDGIALNTRLPLL LDEMLSSENAE
Sequences:
>Translated_251_residues MPANAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTIHCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQ TGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENSRIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAV TLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARHIDRRYAELLVQAQQAGVEVICYGFQLSPDGIALNTRLPLL LDEMLSSENAE >Mature_250_residues PANAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTIHCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQT GDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENSRIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVT LRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARHIDRRYAELLVQAQQAGVEVICYGFQLSPDGIALNTRLPLLL DEMLSSENAE
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=234, Percent_Identity=64.1025641025641, Blast_Score=330, Evalue=8e-92,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_YERP3 (A7FM16)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001402294.1 - STRING: A7FM16 - GeneID: 5387414 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_3337 - NMPDR: fig|349747.3.peg.3374 - eggNOG: COG1489 - HOGENOM: HBG655520 - OMA: NTGSMLN - ProtClustDB: PRK00347 - BioCyc: YPSE349747:YPSIP31758_3337-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 28202; Mature: 28070
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTIHCANTGAMTGCATPGDTIWY CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEE STSDNPKRKYPQSWELTQTQTGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKY CCCCCCHHCCCCCCCCEECCCCCEEEEEECCCCCEEEEEECCCHHHHHCCCHHHHHHHHC GEENSRIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHR CCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCH AVLFFAVLHTGIKQVAPARHIDRRYAELLVQAQQAGVEVICYGFQLSPDGIALNTRLPLL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEECCCHHH LDEMLSSENAE HHHHHHCCCCC >Mature Secondary Structure PANAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTIHCANTGAMTGCATPGDTIWY CCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEE STSDNPKRKYPQSWELTQTQTGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKY CCCCCCHHCCCCCCCCEECCCCCEEEEEECCCCCEEEEEECCCHHHHHCCCHHHHHHHHC GEENSRIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHR CCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCH AVLFFAVLHTGIKQVAPARHIDRRYAELLVQAQQAGVEVICYGFQLSPDGIALNTRLPLL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEECCCHHH LDEMLSSENAE HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA