| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is apaH [H]
Identifier: 153949872
GI number: 153949872
Start: 3884411
End: 3885280
Strand: Direct
Name: apaH [H]
Synonym: YpsIP31758_3446
Alternate gene names: 153949872
Gene position: 3884411-3885280 (Clockwise)
Preceding gene: 153948016
Following gene: 153946929
Centisome position: 82.24
GC content: 47.36
Gene sequence:
>870_bases ATGTCTACTTATCTTATTGGTGATATTCATGGCTGCCTCGATGAATTACTTGCGCTTTTAGCCCAGGTGAACTTCGATCC ACAGCAGGATACTTTATGGCTGACGGGCGATTTAGTTGCCCGTGGTCCCGCTTCATTGGATGTTTTACGTTATGTACGTT CGTTAGGACCCGCAGTTCGTATGGTGCTGGGTAACCATGACCTGCATTTACTGGCAGTCTACGCAGGCATCAGCCGTAAT AAACCAAAAGATCGTATTACCCCACTGCTGGATGCACCCGATGCTGATGAGCTAATTAATTGGCTACGTCGCCAACCCGT TTTGCAGGTTGATGACCAGCTTAAATTGATTATGGCCCACGCAGGCATCACACCACAGTGGGATATTGAAACAGCCAAAA TGTGTGCGCGAGAAGTTGAAGCGGTATTGAGCAGCGACAGTTATCCGCTATTTTTGGATGCGATGTACGGTGATATGCCA AACAACTGGTCACCAGAGCTTACCGGGCTGGCACGTTTGCGCTTTAGTACCAATGCACTTACGCGGATGCGCTTTTGCTT CCCGAATGGCCAACTTGATATGATCTGCAAAGATACGCCAGAAAACGCGCCAGCCCCTCTCAAACCTTGGTTTGACCTAC CAAGGCTCGTTGACCCTGAATATTCAATTATTTTTGGTCATTGGGCATCATTGGAAGGTAAAGGTGTACCAGAGGGGATA TATGGACTGGACACTGGCTGTTGCTGGGGAGGGGATTTAACCCTACTTCGTTGGGAAGATAAACGTTATTTCACACAGCG CGCTTTCAAAGCCGAGGCTGAAATTAATAATAACAATGGATTTGCAGCAGGCAAAGAAGTACAACACTAA
Upstream 100 bases:
>100_bases TATGAAATGATTGATCACCTTGGACAGGCCTTCCGTACTGTAATTCCGGTATTCCGCTTAGCGATCCCAGCCCTGATCCA TTAACCCTGACTCATTAACT
Downstream 100 bases:
>100_bases TTGGTGTGATGCCAAATTAATCTTGTAAAGACGCTAATTAAAGACGCATGAGCCTATGCGTCTTTAGATTTCACCTATAA TTAACAGCATCACTGTCTAT
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSTYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVRMVLGNHDLHLLAVYAGISRN KPKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAHAGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMP NNWSPELTGLARLRFSTNALTRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGI YGLDTGCCWGGDLTLLRWEDKRYFTQRAFKAEAEINNNNGFAAGKEVQH
Sequences:
>Translated_289_residues MSTYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVRMVLGNHDLHLLAVYAGISRN KPKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAHAGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMP NNWSPELTGLARLRFSTNALTRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGI YGLDTGCCWGGDLTLLRWEDKRYFTQRAFKAEAEINNNNGFAAGKEVQH >Mature_288_residues STYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVRMVLGNHDLHLLAVYAGISRNK PKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAHAGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMPN NWSPELTGLARLRFSTNALTRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGIY GLDTGCCWGGDLTLLRWEDKRYFTQRAFKAEAEINNNNGFAAGKEVQH
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=266, Percent_Identity=80.4511278195489, Blast_Score=459, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 32412; Mature: 32281
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVR CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCHHHHHHHHHHHCHHHH MVLGNHDLHLLAVYAGISRNKPKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAH HHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCEECCCHHEEEEEC AGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMPNNWSPELTGLARLRFSTNAL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHEEECCCHH TRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGI HEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC YGLDTGCCWGGDLTLLRWEDKRYFTQRAFKAEAEINNNNGFAAGKEVQH CCCCCCCEECCCEEEEEECCHHHHHHHHHHHHEEEECCCCCCCCCCCCC >Mature Secondary Structure STYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVR CCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCHHHHHHHHHHHCHHHH MVLGNHDLHLLAVYAGISRNKPKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAH HHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCEECCCHHEEEEEC AGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMPNNWSPELTGLARLRFSTNAL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHEEECCCHH TRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGI HEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC YGLDTGCCWGGDLTLLRWEDKRYFTQRAFKAEAEINNNNGFAAGKEVQH CCCCCCCEECCCEEEEEECCHHHHHHHHHHHHEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA