| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949859
Identifier: 153949859
GI number: 153949859
Start: 2824073
End: 2825305
Strand: Reverse
Name: 153949859
Synonym: YpsIP31758_2496
Alternate gene names: NA
Gene position: 2825305-2824073 (Counterclockwise)
Preceding gene: 153947988
Following gene: 153948949
Centisome position: 59.82
GC content: 56.12
Gene sequence:
>1233_bases ATGCCCGTAAAATTAACCACCATTCCCGGTCCGTTTTTACGTCCTTCGCCGCCCAAGCCATTACGCTGGCTGATTGCACT ATTGGGTTTTATTGCCGCAGGAATATTACTGATGCGTTTTCTGGGGAAACTGCTGGGCGATACCGAGTTCTGGTGGTTTG CCATCGGTATCCCGGTGGTTTTCTGGCTGGTTCTCATGGGCTTTCGTCTGGCGATTTATCTGATGCAACAGATCCAGGCC AATGCCTGGGATTCACGGCGTGAGCAGGTCATATTGCAGGAGGTTCGCCGGGGGCGGCGGGCGTTGCAAATTCTGGCGGC CGCATGCAGCACGGCGCATGATCCTAACCTGCAATTTACCGGGATAGCAGACGCATTACTGCGTAATGACAATAAAATCA TTCCCCAGACCGCCTGGAATGGCGGGAGCAGTGTTCGGCACAGCCGGTTGCCGGTCACTGACGGCTTGTCTCCGGATGCA CATTTATCTGCCGCATTTTCTGCTCTGCTGGATAATCTGACTGCCCCCTTGTCCCAGCTTCCCCCTGACAATGCGGTCGC TATTTTGTTGGCGTCTTCTTCTTCGGTGCCCAGAGCCCGGGTGCTGGCACTCTGGCAGCAGGCCTGGCAGGAGAGCGGTA TTGGTCAGCCGACCACATTGCTCTCAGGCCACGGACTGACCGTTATCGATCACTGGCTGGATCATCGCATTAAAGATAGT GCGGTGTTGCTGGTTGTCGCCGTGCAGATAGCCCCTGAACAGCCCGAAATGACCGGCGAGGCCGTGGTGGGTCTGTTATT GGCAAACCGCCTGACCCAAAAAATACTTACCCCGCTGGCGCTGTTACACCGCCCGGAGTGTACCCTCCCGCAGCAAGAGA GCTTGCAGGCGGGGGTGTTACAGGCGGCTGACTGGGTGCCGTTACCCCCGGATACCCTACAACATCTCTGGCTGACCGGA TTATCCGTAGAAAGTGAGGGCTATCGCAGTGCCATCGGTATTCAGGGCAAAGCGCCACTGGCGTGCATCACACCCGGTCC GGATGTGCATAATTTTAATGAATTTTTAGGATGTCCTGGATGTGCAGGTCCGTGGCTGGCGATAGCCGCCGCCGCGCAGG CCATCGGTCATTCCTCAACACCGCATATGATCCTCAGTAGTGAACAAGGCAGTGACACTGTCTGGAGTACCGTCGTATCC CCTAATGCTTCCCGCAAGGAGAATGAAACGTGA
Upstream 100 bases:
>100_bases AAATAGTATGAAATATCACTTCGTCAATACGAATGATACACCTTGTTTTAAAGTTACGACCATATACTTCATTCTGTTAT TTTATATTTGAGTCCTCCCC
Downstream 100 bases:
>100_bases AGCGCATTGCCTTACCGATTAAAAAGCCAGAAGTCTGGTTCTGGATTGTTGCCCTGCTGTTTTTGCTGGCCGGTGCCGTG TTGTGCTGGCTGGTCTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MPVKLTTIPGPFLRPSPPKPLRWLIALLGFIAAGILLMRFLGKLLGDTEFWWFAIGIPVVFWLVLMGFRLAIYLMQQIQA NAWDSRREQVILQEVRRGRRALQILAAACSTAHDPNLQFTGIADALLRNDNKIIPQTAWNGGSSVRHSRLPVTDGLSPDA HLSAAFSALLDNLTAPLSQLPPDNAVAILLASSSSVPRARVLALWQQAWQESGIGQPTTLLSGHGLTVIDHWLDHRIKDS AVLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKILTPLALLHRPECTLPQQESLQAGVLQAADWVPLPPDTLQHLWLTG LSVESEGYRSAIGIQGKAPLACITPGPDVHNFNEFLGCPGCAGPWLAIAAAAQAIGHSSTPHMILSSEQGSDTVWSTVVS PNASRKENET
Sequences:
>Translated_410_residues MPVKLTTIPGPFLRPSPPKPLRWLIALLGFIAAGILLMRFLGKLLGDTEFWWFAIGIPVVFWLVLMGFRLAIYLMQQIQA NAWDSRREQVILQEVRRGRRALQILAAACSTAHDPNLQFTGIADALLRNDNKIIPQTAWNGGSSVRHSRLPVTDGLSPDA HLSAAFSALLDNLTAPLSQLPPDNAVAILLASSSSVPRARVLALWQQAWQESGIGQPTTLLSGHGLTVIDHWLDHRIKDS AVLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKILTPLALLHRPECTLPQQESLQAGVLQAADWVPLPPDTLQHLWLTG LSVESEGYRSAIGIQGKAPLACITPGPDVHNFNEFLGCPGCAGPWLAIAAAAQAIGHSSTPHMILSSEQGSDTVWSTVVS PNASRKENET >Mature_409_residues PVKLTTIPGPFLRPSPPKPLRWLIALLGFIAAGILLMRFLGKLLGDTEFWWFAIGIPVVFWLVLMGFRLAIYLMQQIQAN AWDSRREQVILQEVRRGRRALQILAAACSTAHDPNLQFTGIADALLRNDNKIIPQTAWNGGSSVRHSRLPVTDGLSPDAH LSAAFSALLDNLTAPLSQLPPDNAVAILLASSSSVPRARVLALWQQAWQESGIGQPTTLLSGHGLTVIDHWLDHRIKDSA VLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKILTPLALLHRPECTLPQQESLQAGVLQAADWVPLPPDTLQHLWLTGL SVESEGYRSAIGIQGKAPLACITPGPDVHNFNEFLGCPGCAGPWLAIAAAAQAIGHSSTPHMILSSEQGSDTVWSTVVSP NASRKENET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44333; Mature: 44202
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKLTTIPGPFLRPSPPKPLRWLIALLGFIAAGILLMRFLGKLLGDTEFWWFAIGIPVV CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FWLVLMGFRLAIYLMQQIQANAWDSRREQVILQEVRRGRRALQILAAACSTAHDPNLQFT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH GIADALLRNDNKIIPQTAWNGGSSVRHSRLPVTDGLSPDAHLSAAFSALLDNLTAPLSQL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC PPDNAVAILLASSSSVPRARVLALWQQAWQESGIGQPTTLLSGHGLTVIDHWLDHRIKDS CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCC AVLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKILTPLALLHRPECTLPQQESLQAGVL CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH QAADWVPLPPDTLQHLWLTGLSVESEGYRSAIGIQGKAPLACITPGPDVHNFNEFLGCPG HHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCC CAGPWLAIAAAAQAIGHSSTPHMILSSEQGSDTVWSTVVSPNASRKENET CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PVKLTTIPGPFLRPSPPKPLRWLIALLGFIAAGILLMRFLGKLLGDTEFWWFAIGIPVV CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FWLVLMGFRLAIYLMQQIQANAWDSRREQVILQEVRRGRRALQILAAACSTAHDPNLQFT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH GIADALLRNDNKIIPQTAWNGGSSVRHSRLPVTDGLSPDAHLSAAFSALLDNLTAPLSQL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC PPDNAVAILLASSSSVPRARVLALWQQAWQESGIGQPTTLLSGHGLTVIDHWLDHRIKDS CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCC AVLLVVAVQIAPEQPEMTGEAVVGLLLANRLTQKILTPLALLHRPECTLPQQESLQAGVL CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH QAADWVPLPPDTLQHLWLTGLSVESEGYRSAIGIQGKAPLACITPGPDVHNFNEFLGCPG HHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCC CAGPWLAIAAAAQAIGHSSTPHMILSSEQGSDTVWSTVVSPNASRKENET CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA