| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is dinJ [C]
Identifier: 153949708
GI number: 153949708
Start: 417154
End: 417411
Strand: Reverse
Name: dinJ [C]
Synonym: YpsIP31758_0357
Alternate gene names: 153949708
Gene position: 417411-417154 (Counterclockwise)
Preceding gene: 153948455
Following gene: 153947041
Centisome position: 8.84
GC content: 49.61
Gene sequence:
>258_bases ATGACTGATACTGTTGTTCGTGCCCGAGTTTCACCGGCCTCAAAAGCCGCTGCAATGGCTAATGCCAAAGCCCTTGGCCT CGATTTGTCTACGGTGATCCGTATGGTCGTTAATCGCCTTGCCGTTAACGCAGAACTACCCATTGATTTACTGCAACCTA ATCAGGAAACGTTACAGGCTATTCGAGATCTCGAAAACGGGGTGGAGGTTTACCGTGTTGACTCGGTGGATGCGCTCAAA CGTGATCTTGGTTGGTAA
Upstream 100 bases:
>100_bases TTAGATCATCAAATGAATAGGTTCATCGAATAAACATCGCTCAAACACCTTATTGTAGCTACATCGTAGCTACAATAAGG GTAATTTAATGGAGGTTATT
Downstream 100 bases:
>100_bases CAATGCTGACAATTGTCTATCAGAGCCGCTTTAAAAAAGATGCAAAGCGTTACACCAAGAATAAAAAGGCGCAGAAACAG ACTGCTGACAAACCCCGATG
Product: DNA-damage-inducible protein J
Products: NA
Alternate protein names: DNA-Damage-Inducible Protein J; DNA-Damage-Inducible Protein
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MTDTVVRARVSPASKAAAMANAKALGLDLSTVIRMVVNRLAVNAELPIDLLQPNQETLQAIRDLENGVEVYRVDSVDALK RDLGW
Sequences:
>Translated_85_residues MTDTVVRARVSPASKAAAMANAKALGLDLSTVIRMVVNRLAVNAELPIDLLQPNQETLQAIRDLENGVEVYRVDSVDALK RDLGW >Mature_84_residues TDTVVRARVSPASKAAAMANAKALGLDLSTVIRMVVNRLAVNAELPIDLLQPNQETLQAIRDLENGVEVYRVDSVDALKR DLGW
Specific function: Unknown
COG id: COG3077
COG function: function code L; DNA-damage-inducible protein J
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9259; Mature: 9128
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTVVRARVSPASKAAAMANAKALGLDLSTVIRMVVNRLAVNAELPIDLLQPNQETLQA CCCCHHHCCCCCHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHH IRDLENGVEVYRVDSVDALKRDLGW HHHHHCCCEEEEECCHHHHHHHCCC >Mature Secondary Structure TDTVVRARVSPASKAAAMANAKALGLDLSTVIRMVVNRLAVNAELPIDLLQPNQETLQA CCCHHHCCCCCHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHH IRDLENGVEVYRVDSVDALKRDLGW HHHHHCCCEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA