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The map label for this gene is psaC

Identifier: 153949677

GI number: 153949677

Start: 3029820

End: 3032291

Strand: Reverse

Name: psaC

Synonym: YpsIP31758_2676

Alternate gene names: 153949677

Gene position: 3032291-3029820 (Counterclockwise)

Preceding gene: 153948313

Following gene: 153950536

Centisome position: 64.2

GC content: 49.68

Gene sequence:

>2472_bases
ATGAGCACTTCATTTTTAGTGGGTGCCCAGCGTTATTCTTTTGATCCCAATCTGCTAGTGGATGGCAATAACAACACTGA
TACCTCGTTATTTGAACAGGGCAATGAATTACCGGGCACCTATTTGGTGGATATTATCTTGAATGGGAATAAAGTGGACT
CTACGAATGTGACATTTCATTCGGAGAAATCGCCATCAGGAGAGCCTTTCTTGCAATCTTGCTTAACCAAGGAGCAACTA
TCCCGCTATGGTGTGGATGTTGATGCCTATCCCGAGTTATCTCCAGCATTAAAAAACTCACAGACAAACCCGTGTGTCAA
TTTAGCCGCTATCCCTCAGGCCAGTGAAGAGTTCCAATTTTATAATATGCAGTTGGTACTGAGTATTCCACAAGCGGCTT
TACGGCCTGAAGGTGAAGTGCCAATAGAACGCTGGGATGATGGTATTACGGCTTTTTTGCTGAACTACATGGCAAATATC
AGTGAAACCCAGTTTCGTCAAAATGGTGGATACCGGCGTTCACAATATATCCAGTTATATCCCGGTTTAAATTTGGGGGC
GTGGCGTGTTCGTAATGCGACCAACTGGAGTCAATCTGGCGATAGGGGGGGTAAATGGCAAAGTGCTTATACCTATGCCA
CTCGTGGGATTTATCGTTTAAAGAGCCGGGTGACCTTAGGGGAGAGTTACACCCCAGGTGATTTTTTCGACAGCATTCCC
TTTCGTGGCGTGATGTTGGGGGACGATCCTAATATGCAGCCAAGTAACCAGCGGGATTTTATACCGGTGGTGCGTGGTAT
TGCCCGTAGTCAGGCGCAGGTGGAAATCAGACAAAATGGTTATCTGATTTATAGTACGGTGGTGCCGCCGGGGCCGTTTG
AACTCTCTGACGTGATCCCGAGTAAATCAGGCAGTGACCTACATGTTAGGGTGCTGGAAAGTAACGGGGCATCGCAGGCG
TTTATTGTGCCTTATGAGGTGCCAGCCATTGCATTGCGCAAAGGGCATTTGCGATACAATCTGGTGGCAGGGCAGTATCG
CCCCGCCAATGCTGATGTTGAGACGCCTCCGGTCGCTCAGGCAACCGTCGCCTACGGCTTGCCGTGGAACTTGACCGCAT
TTATCGGTGAGCAGTGGTCGCGGCATTATCAGGCAACCTCTGCCGGATTAGGGGGGCTATTGGGGGAGTATGGCGCATTG
TCATCCAGTATCACGCAGGCAACCAGTCAGTATCACCATCAACAACCGGTTAAAGGGCAAGCCTGGGAGGTTCGATACAA
CAAAACCTTACAAGCCTCTGATACGTCATTTTCATTGGTGAATAGTCAATACAGCACTAATGGTTTCAGTACGTTATCTG
ATGTATTACAAAGTTACCGGCAGAGCGGGAGTGGCGATAATAGAGATAAAATTGACGAAAATTCTCGGTCAAGGGATTTG
CGTAACCAAATCAGTGCGGTCATCGGGCAGTCATTGGGCAAGTTTGGCTACCTGAATCTTAATTGGTCGCGGCAGGTCTA
CCGTGGGCCGATTCCGGCTAAGAATTCGTTGGGAATACACTATAACCTCAATGTCGGTAATAGTTTTTGGGCACTGAGTT
GGGTGCAAAATGCGAATGAGAACAAGAATGATCGGATATTGAGTTTGTCTGTCAGTATTCCGCTGGGAGGTCATCACGAT
ACTTATGCTTCCTATAGAATGACATCTTCCAACGGGAGCAATGATCATGAAATAGGAATGTACGGCCAGGCTTTTGACTC
TCGCTTGAGTTGGAGTGTGCGTCAGGCAGAGCATTATGGTCAACCCAACTCAGGGCATAACAGCGGCTCACTCAGGTTGG
GCTGGCAGGGTTCCTATGGCAATATCGCGGGAAATTACTACTATACTCCGAGCATACGTCAGTTATCCGCTGATGTTTCC
GGAGGGGCGATCATCCATCGGCATGGGCTGACATTAGGGCCGCAAATCAATGGCACCTCCGTGCTGGTTGAAGTTCCGGG
CGTCGGCGGGGTGACCACCACAGAAGATCGCCGTCTGAAAACAGATTTTCGCGGTTACAGCATTGTGTCTGGCCTCTCTC
CTTATCAGGAGCACGATATCGTGTTGGAAACTGCAGATTTACCGCCGGATGCGGAGGTGGCAAAAACAGATACCAAGGTC
TTGCCGACCGAGGGGGCGATTGTTCGTGCCAGTTTTAGCCCGCAAATCGGGGCAAAGGCGCTGATGACGATCACCCGCGC
TAATGGCCAAACCATTCCGTTTGGTGCGATGGCGAGCTTGGTTAATCAGTCGGCCAATGCAGCCATTGTCGATGAAGGGG
GGAAAGCCTATCTAACCGGGTTACCGGAAACAGGGCAGTTATTGGTGCAATGGGGTAAAGATGCGGGCCAACAATGCCGG
GTGGATTACCAGCTCTCGCCAGCGGAAAAAGGTGATACCGGGCTGTATATGCTCAGCGGAGTATGCCATTAA

Upstream 100 bases:

>100_bases
AAAGCACAGTCCAGTAAGTTTCTATTTATATTTTTCAGAAAATACCTGGGGTATTATTTTGAAAAAATTAATAGTTCAAT
TTACTACTATTACTCTATTG

Downstream 100 bases:

>100_bases
AGGCATCCGCGATGACACAATTCCCGTTAGGTTCAATTCCCGTCAGGTTCAATTCCCGCCAGGTTTACTGGCGGGCATTT
TCTACGTTACAACGAGGGCT

Product: fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 823; Mature: 822

Protein sequence:

>823_residues
MSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQL
SRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANI
SETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIP
FRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQA
FIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLGGLLGEYGAL
SSSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDL
RNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRILSLSVSIPLGGHHD
TYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVS
GGAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKV
LPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCR
VDYQLSPAEKGDTGLYMLSGVCH

Sequences:

>Translated_823_residues
MSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQL
SRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANI
SETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIP
FRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQA
FIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLGGLLGEYGAL
SSSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDL
RNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRILSLSVSIPLGGHHD
TYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVS
GGAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKV
LPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCR
VDYQLSPAEKGDTGLYMLSGVCH
>Mature_822_residues
STSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQLS
RYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANIS
ETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPF
RGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAF
IVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLGGLLGEYGALS
SSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLR
NQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRILSLSVSIPLGGHHDT
YASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSG
GAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKVL
PTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCRV
DYQLSPAEKGDTGLYMLSGVCH

Specific function: Involved in the export and assembly of psaA (pH 6) fimbrial subunits across the outer membrane

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family

Homologues:

Organism=Escherichia coli, GI1790772, Length=840, Percent_Identity=36.3095238095238, Blast_Score=475, Evalue=1e-135,
Organism=Escherichia coli, GI1787172, Length=856, Percent_Identity=35.1635514018692, Blast_Score=472, Evalue=1e-134,
Organism=Escherichia coli, GI1786744, Length=851, Percent_Identity=34.6650998824912, Blast_Score=451, Evalue=1e-128,
Organism=Escherichia coli, GI1789533, Length=831, Percent_Identity=35.9807460890493, Blast_Score=430, Evalue=1e-121,
Organism=Escherichia coli, GI1786332, Length=858, Percent_Identity=30.1864801864802, Blast_Score=310, Evalue=2e-85,
Organism=Escherichia coli, GI1788427, Length=830, Percent_Identity=26.3855421686747, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI87081778, Length=803, Percent_Identity=27.1481942714819, Blast_Score=231, Evalue=2e-61,
Organism=Escherichia coli, GI1789610, Length=819, Percent_Identity=25.5189255189255, Blast_Score=135, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSAC_YERPE (P31527)

Other databases:

- EMBL:   X97759
- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- EMBL:   M86713
- PIR:   AD0159
- RefSeq:   NP_670180.1
- RefSeq:   NP_992653.1
- RefSeq:   YP_002346330.1
- ProteinModelPortal:   P31527
- SMR:   P31527
- IntAct:   P31527
- GeneID:   1147827
- GeneID:   1174147
- GeneID:   2765948
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO1305
- KEGG:   ypk:y2880
- KEGG:   ypm:YP_1287
- HOGENOM:   HBG511492
- OMA:   SRTTLML
- ProtClustDB:   CLSK888805
- BioCyc:   YPES187410:Y2880-MONOMER
- BioCyc:   YPES214092:YPO1305-MONOMER
- InterPro:   IPR000015
- InterPro:   IPR018030

Pfam domain/function: PF00577 Usher

EC number: NA

Molecular weight: Translated: 90072; Mature: 89941

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFH
CCCCEEEECCEECCCCCEEEECCCCCCHHHHHCCCCCCCEEEEEEEECCCEECCCEEEEE
SEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQF
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEEE
YNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQYIQLY
EEEEEEEECCHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEE
PGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIP
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCC
FRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIP
CCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHCCC
SKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQ
CCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC
ATVAYGLPWNLTAFIGEQWSRHYQATSAGLGGLLGEYGALSSSITQATSQYHHQQPVKGQ
EEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDL
EEEEEECCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
RNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANE
HHHHHHHHHHHHCCCEEEEECCCCHHCCCCCCCCCCCEEEEEECCCCCEEEEEEHHCCCC
NKNDRILSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYG
CCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
QPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLGPQINGTS
CCCCCCCCCEEEEEEECCCCCCCCCEEECCCHHHHCCCCCCCEEEEECCCEECCCCCCCE
VLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKV
EEEECCCCCCCCCCCCCEEHHCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHCCCCEE
LPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTG
ECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEC
LPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVCH
CCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCEEEECCCCC
>Mature Secondary Structure 
STSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFH
CCCEEEECCEECCCCCEEEECCCCCCHHHHHCCCCCCCEEEEEEEECCCEECCCEEEEE
SEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQF
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEEE
YNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQYIQLY
EEEEEEEECCHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEE
PGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIP
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCC
FRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIP
CCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHCCC
SKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQ
CCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC
ATVAYGLPWNLTAFIGEQWSRHYQATSAGLGGLLGEYGALSSSITQATSQYHHQQPVKGQ
EEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDL
EEEEEECCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
RNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANE
HHHHHHHHHHHHCCCEEEEECCCCHHCCCCCCCCCCCEEEEEECCCCCEEEEEEHHCCCC
NKNDRILSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYG
CCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
QPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLGPQINGTS
CCCCCCCCCEEEEEEECCCCCCCCCEEECCCHHHHCCCCCCCEEEEECCCEECCCCCCCE
VLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKV
EEEECCCCCCCCCCCCCEEHHCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHCCCCEE
LPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTG
ECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEC
LPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVCH
CCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430; 8100346