| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is yclO [H]
Identifier: 153949614
GI number: 153949614
Start: 4617501
End: 4618508
Strand: Direct
Name: yclO [H]
Synonym: YpsIP31758_4093
Alternate gene names: 153949614
Gene position: 4617501-4618508 (Clockwise)
Preceding gene: 153949867
Following gene: 153948535
Centisome position: 97.76
GC content: 46.13
Gene sequence:
>1008_bases ATGCGGGCTGAGGAGTACTCTGCAAAAAACACGCTATTCCAAGGCATAAATAAAGCGTTAACTTTGCCAGCAAAGCGGTT ATTGCTACTGAGCATCATCGCTCTCGGTGCGATGATTATTTTCATGACAATCAATCTGAGTGGCAATATTCAGTATATTC TCGTTCATCGAGGCCTTATTTTAGCCACTATGCTGTTGGTCGCTTTCGCATCCGGTGTGGCTACGGTCTTATTTCAAACG GTAACCAATAATCGTATTTTAACGCCATCAGTCATGGGGCTTGAGGCGCTATTTATTCTGATCCAGACGATGTTGATATT TTTTATTGACGCCAATGGGTTCCGCGCATTAGGTATCACCGGTAAATTTCTCTGTGAATCCGCATTACTGTTGCTGTTCT CCGTTTTCCTTTACCGTTGGTTACTGTCTGGTGTAGGTGTCAATCTGCACAAAGTCCTTTTGGTCGGGTTAGTTTGTGGC ACACTGTTTCGCAGTATTTCTAACCTCATGCAGCGTATTCTTTCTCCCGGTGAATTTGCCATCCTTCAGGGCCGGATCTT CGCTACGTTTACCCGCGCCGCACCAGAAATTATTGCCGTCTCTGCTGGGATCATCGTAATGGTGGGCGTTGTTATTTGGC GTCAGCGTCATTGCCTTGATGTTATTGCTCTTGGCAGAAATACCGCGATTAACCTTGGTGTCGCGTATCAGAAAAAAATA ACCGTTATCCTCCTGTTGGTCTCACTACTGGTCGCCATATCAACCGCCTTGGTGGGGCCGCTGACCTTCTTAGGGTTACT TATTGCGAACCTGGCTTATCCGATTGTGGGCTCATACCGACATCAATATTTACTACCAGGGGTTTTCCTACTGGGGGTGA TTACACTGGTCGGTGGGCAATTAATCCTTGAACGTGTGCTGAATATGGCGGGAACACTGTCCGTCGTTATTGAGTTTGTT GGCGGCGCACTGTTTATTTATCTTTTAATAAAAAAGGCTCCCGTGTGA
Upstream 100 bases:
>100_bases GGCCGATTAATCAGTTACCCTTTTGAAATCCCTGCCAGTGTTATTCTGGGCGTTATTGGCGCACTCGTTTTCCTGTTATT AATTGTTAGGACAAAACGTC
Downstream 100 bases:
>100_bases TTGAAATAAATGATGTTAATAAAAAATACCAACAGACAACGGTACTCAATGAAATCAATGAGCGCATTCCTTCTGGTGGT ATTACCTCAATCATTGGGCC
Product: iron chelate ABC transporter permease
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLILATMLLVAFASGVATVLFQT VTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGITGKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCG TLFRSISNLMQRILSPGEFAILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVIALGRNTAINLGVAYQKKI TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQLILERVLNMAGTLSVVIEFV GGALFIYLLIKKAPV
Sequences:
>Translated_335_residues MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLILATMLLVAFASGVATVLFQT VTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGITGKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCG TLFRSISNLMQRILSPGEFAILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVIALGRNTAINLGVAYQKKI TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQLILERVLNMAGTLSVVIEFV GGALFIYLLIKKAPV >Mature_335_residues MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLILATMLLVAFASGVATVLFQT VTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGITGKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCG TLFRSISNLMQRILSPGEFAILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVIALGRNTAINLGVAYQKKI TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQLILERVLNMAGTLSVVIEFV GGALFIYLLIKKAPV
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG4605
COG function: function code P; ABC-type enterochelin transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 36309; Mature: 36309
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHH LATMLLVAFASGVATVLFQTVTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGIT HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC GKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCGTLFRSISNLMQRILSPGEFA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVIALGRNTAINLGVAYQKKI EEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILERVLNMAGTLSVVIEFVGGALFIYLLIKKAPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAEEYSAKNTLFQGINKALTLPAKRLLLLSIIALGAMIIFMTINLSGNIQYILVHRGLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHH LATMLLVAFASGVATVLFQTVTNNRILTPSVMGLEALFILIQTMLIFFIDANGFRALGIT HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC GKFLCESALLLLFSVFLYRWLLSGVGVNLHKVLLVGLVCGTLFRSISNLMQRILSPGEFA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ILQGRIFATFTRAAPEIIAVSAGIIVMVGVVIWRQRHCLDVIALGRNTAINLGVAYQKKI EEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH TVILLLVSLLVAISTALVGPLTFLGLLIANLAYPIVGSYRHQYLLPGVFLLGVITLVGGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILERVLNMAGTLSVVIEFVGGALFIYLLIKKAPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]