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The map label for this gene is cas1

Identifier: 153949474

GI number: 153949474

Start: 1788553

End: 1789533

Strand: Direct

Name: cas1

Synonym: YpsIP31758_1535

Alternate gene names: NA

Gene position: 1788553-1789533 (Clockwise)

Preceding gene: 153950130

Following gene: 153947144

Centisome position: 37.87

GC content: 47.71

Gene sequence:

>981_bases
ATGGAAAACGCTATTCATTCCTCTGATTTGAAAACGATCCTGCATTCAAAACGATCCAATATTTACTATTTAGAATATTG
CCGCGTATTGGTTAATGGTGGGCGAGTTGAATATGTCACCGATGAAGGTAAACAATCCCTTTACTGGAATATCCCCATAG
CGAACACCACCGTTATTATGCTGGGAACCGGGACTTCGGTGACTCAGGCTGCTATGCGTGAGTTTGCCCGAGCCGGGGTC
TTAGTCGGTTTTTGTGGCGGGGGTGGGACGCCGCTTTTTGCGGCTAATGACGTAGAGGTCAATGTCTCGTGGCTCACTGC
ACAAAGCGAATACCGGCCAACCGAGTATCTGCACGATTGGGTCAGTTTCTGGTTCGATGATGAAAAAAGACTGGCAGCAG
CAGTGGCTTTCCAGCGCATCAGGATCGCCCAAATTCAACAACATTGGCTCAGCAGCCACATACAGCGCGAATCTCTTTTT
CCGGTTAATCACGATCAATTATTATTTATCCTCAGCCGTTTTGAGCAAAATTTAGCAAATTGTCTCACCAGTAATGACCT
TATGGTTCAGGAAGCGGTATTAACAAAGGCACTCTATAAACTGGCTGCTAATACAGTGAATTACGGCGATTTCACCCGCG
CTAAACGCGGTGGGGGCATCGATCTAGCTAATCGTTTTCTCGATCACGGAAATTATCTCGCCTATGGCTTAGCTGCGACG
GCGACATGGGTTATTGGCTTACCCCATGGTCTGTCTGTTTTACACGGTAAGACCCGGCGTGGTGGTTTGGTCTTTGATGT
GGCCGATTTAATTAAAGATGCGCTAGTGCTACCGCAGGCATTTATTGCCGCCATGCAGGGAGAAGAAGAACAAGAATTTC
GTCAGCGCTGCATTAGCGGGTTTCAACGAACCGAAGCGCTGGATGTGATGATTGATGGAATAAAAGAAACGGCAGCGTTA
TGTAGCCAGGTTCCGCGATGA

Upstream 100 bases:

>100_bases
CTTTGGGTATAGAGAGAGTTATTTTTTGGAAGAATATCTGCTAATAAAGCGCTAACGGAAAAATAGCGCGGTAGATATCC
CGCTAAGGAGTTTTTTGGCT

Downstream 100 bases:

>100_bases
ATATTTTACTGATATCCCAATGCCATAAACGGGCGCTTGATGAAACACGCCGTATTTTGGATCAGTTTGCTGAACGTAAA
GGTGATCGGACATGGCAGAC

Product: CRISPR-associated protein Cas1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQAAMREFARAGV
LVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLF
PVNHDQLLFILSRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHGNYLAYGLAAT
ATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVMIDGIKETAAL
CSQVPR

Sequences:

>Translated_326_residues
MENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQAAMREFARAGV
LVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLF
PVNHDQLLFILSRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHGNYLAYGLAAT
ATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVMIDGIKETAAL
CSQVPR
>Mature_326_residues
MENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQAAMREFARAGV
LVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLF
PVNHDQLLFILSRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHGNYLAYGLAAT
ATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVMIDGIKETAAL
CSQVPR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36366; Mature: 36366

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIM
CCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCEEEEE
LGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDW
EECCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCEEEEEEEEECCCCCCCHHHHHHH
VSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFPVNHDQLLFILSRFEQNLAN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
CLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHGNYLAYGLAAT
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHCCCEEEEHHHHH
ATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISG
HHEEEECCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FQRTEALDVMIDGIKETAALCSQVPR
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIM
CCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCEEEEE
LGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDW
EECCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCEEEEEEEEECCCCCCCHHHHHHH
VSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFPVNHDQLLFILSRFEQNLAN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
CLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHGNYLAYGLAAT
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHCCCEEEEHHHHH
ATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISG
HHEEEECCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FQRTEALDVMIDGIKETAALCSQVPR
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA