Click here to switch to the map view.

The map label for this gene is fliQ [H]

Identifier: 153949470

GI number: 153949470

Start: 2605984

End: 2606253

Strand: Direct

Name: fliQ [H]

Synonym: YpsIP31758_2303

Alternate gene names: 153949470

Gene position: 2605984-2606253 (Clockwise)

Preceding gene: 153950312

Following gene: 153948291

Centisome position: 55.17

GC content: 52.22

Gene sequence:

>270_bases
ATGACTCCAGAATCAGTAATGGCTCTCGGTACCGAGGCAATGAAGATCGCCTTGGCACTGGCTGCGCCACTGTTACTGGC
CGCGCTCATCAGCGGGCTAATTGTCAGCCTGCTACAGGCAGCAACACAGATCAACGAAATGACCCTGTCATTCATCCCTA
AAATACTGGCGGTCTTCACCACTATGGTGATTGCAGGCCCGTGGATGCTGAACTTGATCCTGGACTATATGCGCAATTTA
TTCACCAGCCTGCCCACGTTGATTGGCTAG

Upstream 100 bases:

>100_bases
CCAGTATATTTCACGTTACAGGTGCGTTGATGGTGGGTGCTCTCCCGTCACTGGCTTATCGCGTATTCACTCCCACAGTT
AGGCAAGAGGCAGACACGTC

Downstream 100 bases:

>100_bases
CCATGCTGTCCTTTGATACCCACCAACTCAGCGTCTGGGTTAGCCAATACTTTTGGCCGTTGGTCCGGGTATTGGCCCTG
ATCGGCACCGCCCCGCTGTT

Product: flagellar biosynthesis protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTPESVMALGTEAMKIALALAAPLLLAALISGLIVSLLQAATQINEMTLSFIPKILAVFTTMVIAGPWMLNLILDYMRNL
FTSLPTLIG

Sequences:

>Translated_89_residues
MTPESVMALGTEAMKIALALAAPLLLAALISGLIVSLLQAATQINEMTLSFIPKILAVFTTMVIAGPWMLNLILDYMRNL
FTSLPTLIG
>Mature_88_residues
TPESVMALGTEAMKIALALAAPLLLAALISGLIVSLLQAATQINEMTLSFIPKILAVFTTMVIAGPWMLNLILDYMRNLF
TSLPTLIG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

Organism=Escherichia coli, GI1788260, Length=89, Percent_Identity=78.6516853932584, Blast_Score=104, Evalue=1e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9504; Mature: 9373

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPESVMALGTEAMKIALALAAPLLLAALISGLIVSLLQAATQINEMTLSFIPKILAVFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMVIAGPWMLNLILDYMRNLFTSLPTLIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPESVMALGTEAMKIALALAAPLLLAALISGLIVSLLQAATQINEMTLSFIPKILAVFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMVIAGPWMLNLILDYMRNLFTSLPTLIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]