| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is fhuB [H]
Identifier: 153949423
GI number: 153949423
Start: 3744520
End: 3746532
Strand: Reverse
Name: fhuB [H]
Synonym: YpsIP31758_3331
Alternate gene names: 153949423
Gene position: 3746532-3744520 (Counterclockwise)
Preceding gene: 153949125
Following gene: 153948554
Centisome position: 79.32
GC content: 54.69
Gene sequence:
>2013_bases GTGGGGGAAAGCACCATGAGCGCCATAAGTTTACGCCAGGGTTGGCGGCTCCCTGCGGGTCTACTTGGCCTACTGGTGGT TATTGCCGTTTCCCTGACATTTTATAACCTCAGTCAATTACTGCCTTCCTCTCTCTGGTCTGAAGCCCTATGGCGACCTG ATCGAGACGATGTACGCCAGATGCTATTTCATTACAGCCAATTACCTCGCCTAGCGGTGGCATTACTCACCGGAGCGGGG CTGGGGCTGGTAGGGGTTTTATTTCAACAAGTTCTGCGTAATCCCCTGGCTGAACCGGCCACTCTGGGGGTTGCCGCGGG AGCCCAGTTAGGGCTAACGATAGCCACACTGTGGATGTTACCCGGTGGTGAGTTAACCCGGCAACTGGCGGCAATGGCCG GTGGTATGACGGTTGGGGCACTGGTCTTTGGCGTAGCTTGGGGGAAGCGCCTGTCACCGGTGACATTGATTTTGGCCGGT CTGGTGTTGGGGCTTTACTGTAGCGCGGTGAGTAACCTACTGGCACTGTTCAATTATGACCAGTTACAGGGGCTATTTTT GTGGAGCAGTGGCGCACTGAATCAGCAGGATTGGAGTACGGTACAGTTTCTGTTACCGCGCTTACTGATTAGCGGCATAT TGGCGGCCTTCTTGATTCGTCCGTTGACCCTCTTGGGGTTAGATGATGGTGTCGCTCGCAATCTGGGGTTAGGGCTGTCA CTGGCCCGCCTGAGTGCGCTGGGATTAGCCATTATATTCAGCGCCATGTTGGTTAATGCGGTGGGTGTGATTGGTTTTAT CGGGCTGTTTGCACCATTGTTGGCGAAAATTTTGGGGGCACGGCGCTTATCACAACGTCTGATACTGGCCCCTATTGTCG GGGCATTGCTGCTCTGGGTGACGGACCAGGGCATCATCTGGCTGACACAAGTCTGGCGAGAGATCCCAACCGGTGCCGCT ACGGCGCTGATTGGTGCGCCATTGTTATTGTGGTTGTTGCCTCGCTTACACAGTACGACTGCGCCAAACATGGATTTGGG TGACTCGGTTCCGGTAGAGCGGCAGCGTTTAGGATTATGGATCAGCGCGGGTTTGCTGCTGCTGTTGGGGGGATTGATCG TGGCGCTGATGTTTGGCCGTGATAGCCAAGGTTGGCGCTGGATCGTCGGTGATGAATTACAGGCGCTGTTACATTGGCGC TGGCCACGGGTATTGGCGGCACTGGCTGCCGGTATGATGCTGGCGGTTGCAGGAACATTAATTCAAAAGTTGACTGGTAA TCCGATGGCCAGCCCGGAAGTGTTGGGTATCAGCTCTGGTGCAGCTTTCGGCGTGGTCATTATGTTGTTTATCGTCCCTG GTAATGCACTGGAATGGTTGTTGCCTGCGGGGAGCCTAGGGGCTGCCATCACGCTATTGCTGATCATGGTTGTCGCTGGG CGAGGCGGGTTTTCTCCGGGCAGGATGCTATTGGCAGGGATTGCATTGAGTACCGCTTTTACCACGGTGATCACCATGTT GCTGGCCAGTGGCGACCCACGGATGCGCGGGTTACTGGCATGGATTTCTGGCTCAACTTATTCTGTTGAGGGCTCACAAG CGTTGACGACAGGCTTAATTGCCGTGGTGTTGATAGCACTAGCCCCTTTGTGCCGCCGTTGGTTAATGATTTTGCCATTA GGCAGTGTAACCGCCAGAGCATTAGGGATGGCTCTGGCCCCCAGCCGGTTAGCGATTTTATTATTGGCAGCCACATTGAC GGCTGCGGCGACCCTGACCGTCGGGCCGTTGAGTTTTGTGGGATTGATGGCTCCGCATATGGCCCGGATGCTGGGTTTCC GTCGTGCTATTCCGCAACTGATTATTGCGGCTATTTTGGGCGGATTATTGATGATATTAGCTGATTGGTGTGGGCGGATG CTGTTGTTCCCAAATCAGATCCCCGCAGGTCTATTAGCGACATTTATCGGGGCGCCCTATTTTGTTTATTTGCTGCGCAA ACAGGGGCGGTAA
Upstream 100 bases:
>100_bases TGTCTTTTGTACGAGAAAACCAATTACGTCTCTTGCCACCGGTTTGGTTCTACGGCGCGACACTGTCAGCTATGCGTTTC GTTCGTTTACTGGAACAGGC
Downstream 100 bases:
>100_bases TTTTATCAGGCGAATGCCCTGCTAATTTGACGCCGCCGCGTGACTATTCTGCCTATCCTCACCGTTTCAGATCGCGTCAT TGAGGGTTGTCAGCAGTCTG
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 670; Mature: 669
Protein sequence:
>670_residues MGESTMSAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQMLFHYSQLPRLAVALLTGAG LGLVGVLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWMLPGGELTRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAG LVLGLYCSAVSNLLALFNYDQLQGLFLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLS LARLSALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWVTDQGIIWLTQVWREIPTGAA TALIGAPLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLWISAGLLLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWR WPRVLAALAAGMMLAVAGTLIQKLTGNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAG RGGFSPGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLIAVVLIALAPLCRRWLMILPL GSVTARALGMALAPSRLAILLLAATLTAAATLTVGPLSFVGLMAPHMARMLGFRRAIPQLIIAAILGGLLMILADWCGRM LLFPNQIPAGLLATFIGAPYFVYLLRKQGR
Sequences:
>Translated_670_residues MGESTMSAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQMLFHYSQLPRLAVALLTGAG LGLVGVLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWMLPGGELTRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAG LVLGLYCSAVSNLLALFNYDQLQGLFLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLS LARLSALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWVTDQGIIWLTQVWREIPTGAA TALIGAPLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLWISAGLLLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWR WPRVLAALAAGMMLAVAGTLIQKLTGNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAG RGGFSPGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLIAVVLIALAPLCRRWLMILPL GSVTARALGMALAPSRLAILLLAATLTAAATLTVGPLSFVGLMAPHMARMLGFRRAIPQLIIAAILGGLLMILADWCGRM LLFPNQIPAGLLATFIGAPYFVYLLRKQGR >Mature_669_residues GESTMSAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQMLFHYSQLPRLAVALLTGAGL GLVGVLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWMLPGGELTRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAGL VLGLYCSAVSNLLALFNYDQLQGLFLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLSL ARLSALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWVTDQGIIWLTQVWREIPTGAAT ALIGAPLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLWISAGLLLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWRW PRVLAALAAGMMLAVAGTLIQKLTGNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAGR GGFSPGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLIAVVLIALAPLCRRWLMILPLG SVTARALGMALAPSRLAILLLAATLTAAATLTVGPLSFVGLMAPHMARMLGFRRAIPQLIIAAILGGLLMILADWCGRML LFPNQIPAGLLATFIGAPYFVYLLRKQGR
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=645, Percent_Identity=68.3720930232558, Blast_Score=779, Evalue=0.0, Organism=Escherichia coli, GI1790741, Length=282, Percent_Identity=37.5886524822695, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI1790740, Length=309, Percent_Identity=33.0097087378641, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786805, Length=288, Percent_Identity=34.375, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1786804, Length=322, Percent_Identity=32.2981366459627, Blast_Score=100, Evalue=5e-22, Organism=Escherichia coli, GI1788004, Length=273, Percent_Identity=31.1355311355311, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 70861; Mature: 70730
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGESTMSAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQ CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH MLFHYSQLPRLAVALLTGAGLGLVGVLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWML HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHC PGGELTRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAGLVLGLYCSAVSNLLALFNYD CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH QLQGLFLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLS HHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHH LARLSALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDQGIIWLTQVWREIPTGAATALIGAPLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLW CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ISAGLLLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWRWPRVLAALAAGMMLAVAGTL HHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQKLTGNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAG HHHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHC RGGFSPGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH AVVLIALAPLCRRWLMILPLGSVTARALGMALAPSRLAILLLAATLTAAATLTVGPLSFV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLMAPHMARMLGFRRAIPQLIIAAILGGLLMILADWCGRMLLFPNQIPAGLLATFIGAPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH FVYLLRKQGR HHHHHHHCCC >Mature Secondary Structure GESTMSAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQ CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH MLFHYSQLPRLAVALLTGAGLGLVGVLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWML HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHC PGGELTRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAGLVLGLYCSAVSNLLALFNYD CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH QLQGLFLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLS HHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHH LARLSALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDQGIIWLTQVWREIPTGAATALIGAPLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLW CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ISAGLLLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWRWPRVLAALAAGMMLAVAGTL HHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQKLTGNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAG HHHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHC RGGFSPGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH AVVLIALAPLCRRWLMILPLGSVTARALGMALAPSRLAILLLAATLTAAATLTVGPLSFV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLMAPHMARMLGFRRAIPQLIIAAILGGLLMILADWCGRMLLFPNQIPAGLLATFIGAPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH FVYLLRKQGR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]