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The map label for this gene is ygbL [H]

Identifier: 153949402

GI number: 153949402

Start: 3098995

End: 3099690

Strand: Reverse

Name: ygbL [H]

Synonym: YpsIP31758_2747

Alternate gene names: 153949402

Gene position: 3099690-3098995 (Counterclockwise)

Preceding gene: 153949080

Following gene: 153948089

Centisome position: 65.63

GC content: 51.44

Gene sequence:

>696_bases
TTGGAGCCGCCACCAGCGTCAAAACTGTCACCACCTGCCAAACAAGTACCCTTTTCGGAGCAACAAGTGCGTGATGATTT
GGTGAACTACGCCCGCTCATTATTCCAACGGGGGTTGAGCAGTGGGGGTTCCGGCAATATTAGCGTCAAGCTGCCTGACG
GTAGCTTTCTGGTCACTCCGACCAATTCCTGCCTGGGTGAATTGGATAGCCAAACACTGAGTAAACTCGATGCCGAGGGG
AACCACATCAGCGGTGACAAACCGTCGAAAGAGGTGCCGATGCATTTGGCAATGTACCGTGCCAGATCCACGTGCGGGGC
GGTGGTTCATTTGCACTCACCGTATCTGACCGCCTTGTCATGTCTCACAAATATTGATCATACGAATTGTTTGCCCCCCA
TTACACCTTACTATGTAATGCGCATCGGGCGTCTTCCTTTGTTGTCTTATATGAAACCCGGCGATCCGGCCATTGCCACC
GCCCTTGCCGATACCGCACGCGATCACAATGCCGTTTTGCTGGCGAACCATGGCCCGGTTGTCAGTGGTTCAACGCTGCG
GGAAGCGGTGTTCAACGCGGAAGAACTTGAAGATACGGCACGGCTCTATTTTCTGATAAAGCCTTATGATTACAGTCAAT
TAACAACCTCATCCATTGATGAGTTGGCTCAATCGTACCGCAACAAAATAGGATAA

Upstream 100 bases:

>100_bases
TGGCACTCAAGTCCGGTAATTTTGGTAATGAACACTTTTTTGTGGCAGCACAGGAGTATACAGAGTGAACAGCCCCCCGT
TTTCAGAGCCGCCACCATCT

Downstream 100 bases:

>100_bases
TGATGATGATCCCTGAACAGCGTCGTGACTTTATCTACCGCTACGTGCATGAGCAGAATGTCGCATCCTTCATGGATCTG
GCCGAGTTGATGAACGTGTC

Product: aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNISVKLPDGSFLVTPTNSCLGELDSQTLSKLDAEG
NHISGDKPSKEVPMHLAMYRARSTCGAVVHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLLSYMKPGDPAIAT
ALADTARDHNAVLLANHGPVVSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRNKIG

Sequences:

>Translated_231_residues
MEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNISVKLPDGSFLVTPTNSCLGELDSQTLSKLDAEG
NHISGDKPSKEVPMHLAMYRARSTCGAVVHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLLSYMKPGDPAIAT
ALADTARDHNAVLLANHGPVVSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRNKIG
>Mature_231_residues
MEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNISVKLPDGSFLVTPTNSCLGELDSQTLSKLDAEG
NHISGDKPSKEVPMHLAMYRARSTCGAVVHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLLSYMKPGDPAIAT
ALADTARDHNAVLLANHGPVVSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRNKIG

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=203, Percent_Identity=54.679802955665, Blast_Score=227, Evalue=5e-61,
Organism=Escherichia coli, GI1789164, Length=181, Percent_Identity=30.3867403314917, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 25087; Mature: 25087

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNISVKLPDGSFLVTP
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEC
TNSCLGELDSQTLSKLDAEGNHISGDKPSKEVPMHLAMYRARSTCGAVVHLHSPYLTALS
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHH
CLTNIDHTNCLPPITPYYVMRIGRLPLLSYMKPGDPAIATALADTARDHNAVLLANHGPV
HHHCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
VSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRNKIG
CCCHHHHHHHHCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNISVKLPDGSFLVTP
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEC
TNSCLGELDSQTLSKLDAEGNHISGDKPSKEVPMHLAMYRARSTCGAVVHLHSPYLTALS
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHH
CLTNIDHTNCLPPITPYYVMRIGRLPLLSYMKPGDPAIATALADTARDHNAVLLANHGPV
HHHCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
VSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRNKIG
CCCHHHHHHHHCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]