Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153949390

Identifier: 153949390

GI number: 153949390

Start: 2734852

End: 2735286

Strand: Direct

Name: 153949390

Synonym: YpsIP31758_2425

Alternate gene names: NA

Gene position: 2734852-2735286 (Clockwise)

Preceding gene: 153950028

Following gene: 153948545

Centisome position: 57.9

GC content: 39.08

Gene sequence:

>435_bases
ATGGCGCGGCTCGAGCCTACATGGATGTATTTACGGCGTCTTTACGACCTGCCTGTTCTCTCCGTCGCGGGCACTTTGTC
AATAACCTCACTTATCTTTTTAATTTCTTTCTCTACTCTTGCAGCAGAAGTTAATCAGAATAAAGTGCAACAAAAAAACA
ATTTAGAAAATTTTGCATTAAGCATTTGTTTAGCAGAGGGTTTTCCTGATGGAGAAATAAATAGCGAGGCCTTTTCTGCG
GTCGGTGCTTATGTGGAGTTAGGCGCTTATCCTGTAGAAGCGTATGAAGAAGTTAGCGAACTTGCCAAAAAATTCCTAGA
AAAGAAATATATCAGCAAAAATGGCGAATCAAAACTCACCGTTATGAAGTGTATCGATTTATCTCAAAGTAGTGAGCTCA
GTGCTATTAAAGATAAGTATACCCGTCATATTTAA

Upstream 100 bases:

>100_bases
GGCTGCTAAAATAATATCACTTATCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAGGATAGGCAGAGGA
GTAAAGCGTCCGCGCCAAGG

Downstream 100 bases:

>100_bases
CGTGCATATGCGTTGGCTGTCCTCGTTCACCCCAGTCACTTACCTGTGTAAGCTCCTGGGGATTCTCTCAGTTGCCGCCT
TCCTGAAGCTCGAATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFALSICLAEGFPDGEINSEAFSA
VGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI

Sequences:

>Translated_144_residues
MARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFALSICLAEGFPDGEINSEAFSA
VGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI
>Mature_143_residues
ARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFALSICLAEGFPDGEINSEAFSAV
GAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16096; Mature: 15964

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFAL
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
SICLAEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLT
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VMKCIDLSQSSELSAIKDKYTRHI
HHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ARLEPTWMYLRRLYDLPVLSVAGTLSITSLIFLISFSTLAAEVNQNKVQQKNNLENFAL
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
SICLAEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLT
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VMKCIDLSQSSELSAIKDKYTRHI
HHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA