| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949378
Identifier: 153949378
GI number: 153949378
Start: 1134705
End: 1136891
Strand: Reverse
Name: 153949378
Synonym: YpsIP31758_0947
Alternate gene names: NA
Gene position: 1136891-1134705 (Counterclockwise)
Preceding gene: 153949660
Following gene: 153948957
Centisome position: 24.07
GC content: 41.93
Gene sequence:
>2187_bases ATGCATAATAAATTTAAGGCGAATACTCTCGCCATAAGTATCGCTGCTATTTTATTGTCGGTCTCTTTTAATACACTTGC CGTAGTATGCCCACCAGAAGCGCCGGCTGGCAGTAGTTGTGATGCGTTCATCGCTAATGATGGCAAGGCTGTGTCATTAG CTAATGATTTATATATCACCAATGGAAATGCATTAACTTATTCAGGTAACACTCCCTTTGTAGCACAATATTTGCGTAAA AATATTATTGCCACCGGCACGGATGCACACGCTATTTATGCTGATGCAAACACCGTATTCAACAATAACATTAACCTCGA AAGAGGTATTAGTATTATCAGCGAGAATGGTACAGCAATTAAAATTGACGGTTCATTCTCTCACACAGCCGCAGCACCTA ACTTTGGTATAGCCGTTAAAGATGGCTCTATTGTGAGAGGGAATGGTGCCGCTATCGATTTCCGTGATGCTCAAACAGCC ATTCGTATGGATATTAATGGCAGTATCTATGGCGATATCCTGGGTAATGGGGTCACAGGAAATAAAATTAACTTTGCCTA TCAAGGCGCTACAGCGAATGCCTTATTCGATGGTTATACAATTTCAGGTGTTGAAAAATTAGAAAACTGGGGCAACCTGA GTATTATTGCAAAAGACAGAACCATCACTTGGAGTGGTGATTTTACGAATAAAAACAATGCATCCCTTGACTTTAAAATT GGTGATGAGGTGGATTTAGCATCGCCCATTTTACTCGTTGAAGGTAAAACAGTATTTAATACAGGAAGTAAAGCCCTGTT CTCCTATGTGGGCAGTAATATTAATGACATCGTGAATAAAGATATTATCCTGATCCAGTCCAATGGTGGGATGAGCGGGC CAATTGATGTTGCCCAAAATGAAATCACCGTGGTCAGCAACCTCTCGCCGTTATTAGCACAGACAGATTCTTGGGTGACG ACGACAGACCCCATAGTGAACGGGGGAATAAGCGGTAACCAGTTAGTCGTACGTTATGGTGTGAACTACGAAGGTACCGA TAATTTCCTAGACCTGGCACTTCAAGGTGGAGCTAATCAATATCAGCTCAATGCAGCGAATTATATTGTGAGTTATGCAC TCAGCCAATACAACAAAACCCAATCCGAAGCGAGTGGTGAATTACTGGCATTACTGACGTCAGCCGGTAATAGTAGTGCA GGTATTGCCAGTATAGCCGATCAGATAACCCCTAATGCGGAAGGCGGTGAAGTCCGGGCTGCATTACGGATGGTAGATAA AATGCGCGATCAAATAGATAACCGCAGCCTCTATTTACGTAATCAGTCAGCAGCAACTCCGTGGAATTTCTGGGCACAAA CCTTATACGCCCACAGCCGTCAAAGCAGCGGGACTTATACACCGGGATATCAAACCAATGGTTATGGCATTAATGTCGGT GTAGACCGCCGTTTTAATGATGAATCACTATTTGGTGTTTCTCTTGGCTATCAGAATGCCAATATTAACATTCACAGCTA TGGCAATGAAAAAGATGTCGATAGCTATGAACTTATGGCTTATACCGGCTGGTTTGATGATCGTTACTTCTTCAATGGTA ACGTGAATATGGGATATAACAGCAATAGCAGCACCCGCAATATTGGTGAAAATACCGGTTATCAAGGGAATACAAAAGCA ACGGCAGACTATAACAGCTTACAAATGGGTTATCAGGTCAAGGCTGGCATGACCTTTGATTTGGATGTGGTGAAACTACA GCCAAGTGTTGCCTATAACTATCAATGGCTTCGTGTGGATGACTATGCAGAGTTCGGCTCACCGGCCAGTTTGGAAGTGG ATCGCCAATCTTATTCAGTAAAACATTTAGGTGCTGGTTTAACCGCATTTAATACCTATGAGTTAGGAATGGGTTTATTG ACGCCGTCACTGACATTAATGGGTTACCGTGACCTGAATGACACCGAGATTATTGTCAAAAAGGCCGGATTAACCACAGA TCAGGGGAAAGGAAAAGGCCGTTTTATCGTTGAAGGTGATAGCGTCGGCAATAATATTTTTGAAGCAAAAATGAACTCTA ATTTGCAGTTAAAAAATAATCTTAGTCTGGATGGAAATATTAATTACTACAAACGTGGTGATTATAACGAAGGCTATATC GGTCTGAGTGTTTCTAAACACTTCTAA
Upstream 100 bases:
>100_bases CTTTTTACTTAAAGCGGCACTGATGTCATTTGCAGCTTAAAATAATCTGGCCATACCTCTTTACATTCATTTTTATTCCT GTTTATTGGAAGGTAATGTC
Downstream 100 bases:
>100_bases AATTTTGTGGTCAGCAGAAATAGTGTCTTCCTCCTCTGATGACCACCTTTTTATTGGGTAGCGACGATTATGTATGCACC ATCCAGGTTAAAACTTATTG
Product: autotransporter protein
Products: NA
Alternate protein names: Exoprotein With Autotransporter; Outer Membrane Autotransporter
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLANDLYITNGNALTYSGNTPFVAQYLRK NIIATGTDAHAIYADANTVFNNNINLERGISIISENGTAIKIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFRDAQTA IRMDINGSIYGDILGNGVTGNKINFAYQGATANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNASLDFKI GDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPIDVAQNEITVVSNLSPLLAQTDSWVT TTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQGGANQYQLNAANYIVSYALSQYNKTQSEASGELLALLTSAGNSSA GIASIADQITPNAEGGEVRAALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGYGINVG VDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNVNMGYNSNSSTRNIGENTGYQGNTKA TADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQWLRVDDYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYELGMGLL TPSLTLMGYRDLNDTEIIVKKAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDYNEGYI GLSVSKHF
Sequences:
>Translated_728_residues MHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLANDLYITNGNALTYSGNTPFVAQYLRK NIIATGTDAHAIYADANTVFNNNINLERGISIISENGTAIKIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFRDAQTA IRMDINGSIYGDILGNGVTGNKINFAYQGATANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNASLDFKI GDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPIDVAQNEITVVSNLSPLLAQTDSWVT TTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQGGANQYQLNAANYIVSYALSQYNKTQSEASGELLALLTSAGNSSA GIASIADQITPNAEGGEVRAALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGYGINVG VDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNVNMGYNSNSSTRNIGENTGYQGNTKA TADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQWLRVDDYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYELGMGLL TPSLTLMGYRDLNDTEIIVKKAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDYNEGYI GLSVSKHF >Mature_728_residues MHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLANDLYITNGNALTYSGNTPFVAQYLRK NIIATGTDAHAIYADANTVFNNNINLERGISIISENGTAIKIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFRDAQTA IRMDINGSIYGDILGNGVTGNKINFAYQGATANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNASLDFKI GDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPIDVAQNEITVVSNLSPLLAQTDSWVT TTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQGGANQYQLNAANYIVSYALSQYNKTQSEASGELLALLTSAGNSSA GIASIADQITPNAEGGEVRAALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGYGINVG VDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNVNMGYNSNSSTRNIGENTGYQGNTKA TADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQWLRVDDYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYELGMGLL TPSLTLMGYRDLNDTEIIVKKAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDYNEGYI GLSVSKHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78584; Mature: 78584
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLANDLYIT CCCCCCCHHHHHEEEHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEE NGNALTYSGNTPFVAQYLRKNIIATGTDAHAIYADANTVFNNNINLERGISIISENGTAI CCCEEEECCCCHHHHHHHHHCEEECCCCCEEEEECCCEEECCCCCHHHCEEEEECCCCEE KIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFRDAQTAIRMDINGSIYGDILGNGVTG EECCCCCCCCCCCCCEEEEECCCEEECCCCEEEECCCCEEEEEECCCEEEEEEECCCCCC NKINFAYQGATANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNASLDFKI CEEEEEECCCCCCEEECCEEECCHHHHCCCCCEEEEEECCEEEECCCCCCCCCCEEEEEE GDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPIDVAQN CCCCCCCCCEEEEECCEEECCCHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCC EITVVSNLSPLLAQTDSWVTTTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQGGANQ CEEEEECCCHHHHCCCCCEEECCCEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCCE YQLNAANYIVSYALSQYNKTQSEASGELLALLTSAGNSSAGIASIADQITPNAEGGEVRA EEEEHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHH ALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGYGINVG HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE VDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNVNMGYN ECCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCEEECCC SNSSTRNIGENTGYQGNTKATADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQWLRVD CCCCCCCCCCCCCCCCCCEEECCCCCEEECEEEECCCEEEEEEEEECCCEEEEEEEEEEC DYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYELGMGLLTPSLTLMGYRDLNDTEIIVK CHHHCCCCCEEEECCCCCCCHHHCCCCEEEEEHHCCCHHHCCCEEEEEECCCCCCEEEEE KAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDYNEGYI ECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCEE GLSVSKHF EEEEECCC >Mature Secondary Structure MHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLANDLYIT CCCCCCCHHHHHEEEHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEE NGNALTYSGNTPFVAQYLRKNIIATGTDAHAIYADANTVFNNNINLERGISIISENGTAI CCCEEEECCCCHHHHHHHHHCEEECCCCCEEEEECCCEEECCCCCHHHCEEEEECCCCEE KIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFRDAQTAIRMDINGSIYGDILGNGVTG EECCCCCCCCCCCCCEEEEECCCEEECCCCEEEECCCCEEEEEECCCEEEEEEECCCCCC NKINFAYQGATANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNASLDFKI CEEEEEECCCCCCEEECCEEECCHHHHCCCCCEEEEEECCEEEECCCCCCCCCCEEEEEE GDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPIDVAQN CCCCCCCCCEEEEECCEEECCCHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCC EITVVSNLSPLLAQTDSWVTTTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQGGANQ CEEEEECCCHHHHCCCCCEEECCCEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCCE YQLNAANYIVSYALSQYNKTQSEASGELLALLTSAGNSSAGIASIADQITPNAEGGEVRA EEEEHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHH ALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGYGINVG HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE VDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNVNMGYN ECCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCEEECCC SNSSTRNIGENTGYQGNTKATADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQWLRVD CCCCCCCCCCCCCCCCCCEEECCCCCEEECEEEECCCEEEEEEEEECCCEEEEEEEEEEC DYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYELGMGLLTPSLTLMGYRDLNDTEIIVK CHHHCCCCCEEEECCCCCCCHHHCCCCEEEEEHHCCCHHHCCCEEEEEECCCCCCEEEEE KAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDYNEGYI ECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCEE GLSVSKHF EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA