| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949372
Identifier: 153949372
GI number: 153949372
Start: 1550200
End: 1550805
Strand: Reverse
Name: 153949372
Synonym: YpsIP31758_1324
Alternate gene names: NA
Gene position: 1550805-1550200 (Counterclockwise)
Preceding gene: 153948945
Following gene: 153947349
Centisome position: 32.83
GC content: 44.88
Gene sequence:
>606_bases ATGGTTCCACATCAACAAATTATTCAGTGGTTACGAACTGATCCTTATCGTATGCAGGCACTGTATACGGCTCGTGAGCT AGGATTAAACCAGTGGTGCCTGGCGGCAGGTTTTGTCCGTAATCTGGTATGGGATCAATTGCATGGATATCTTTCCCCAA CACCGCTGAATGATATTGATTTAGTCTATTTCGATAAGAAAGATATCAGTGAGCAGCATGACTTACAGCTAGAGGCGCTA TTGCTTAATAAGCACATGCCTCATAAACAAACTGTTCATAAACAAATGGTTCATAAACAAACGGCTCAAAAAAACAGATT CCCTTGGTCTGTGAAAAACCAGGCGAGGATGCATCTACATAGCGGCCGCCTGCCGTATACCAGCACTGAAGATGCCATCA GCTATTGGGTTGAAATCGAAACCGCTATTGGTGCCAGGCTCACAGATGAGGGCGAAATCGAACTAATTGCCCCTCTTGGT TTAGCCGCGCTTTTTGCCCTAACGGTCACACTAAATCCAAAAAACGGCGAACTAGCGACCTTTGATCAACGGGTCAACAG CAAAAGTTGGCTACAGCATTGGCCAAATTTACATGTAGTCGCTTAG
Upstream 100 bases:
>100_bases GTTAAAATAGACCGTGAAAATTAATCGGTCCTCTATGCCATTATCGATTACTGCTATCCTGTTTTCATACTGATGATCTT AATTACCATGAGGATTGATG
Downstream 100 bases:
>100_bases TCATCCTCAAAACAGCCAAATGATAAGATTGTGTAAATGATAAGATTGTGTAAGTGATAAGATAGTGTAAAAGTCACTTC AAATGCTAAAGGTTAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MVPHQQIIQWLRTDPYRMQALYTARELGLNQWCLAAGFVRNLVWDQLHGYLSPTPLNDIDLVYFDKKDISEQHDLQLEAL LLNKHMPHKQTVHKQMVHKQTAQKNRFPWSVKNQARMHLHSGRLPYTSTEDAISYWVEIETAIGARLTDEGEIELIAPLG LAALFALTVTLNPKNGELATFDQRVNSKSWLQHWPNLHVVA
Sequences:
>Translated_201_residues MVPHQQIIQWLRTDPYRMQALYTARELGLNQWCLAAGFVRNLVWDQLHGYLSPTPLNDIDLVYFDKKDISEQHDLQLEAL LLNKHMPHKQTVHKQMVHKQTAQKNRFPWSVKNQARMHLHSGRLPYTSTEDAISYWVEIETAIGARLTDEGEIELIAPLG LAALFALTVTLNPKNGELATFDQRVNSKSWLQHWPNLHVVA >Mature_201_residues MVPHQQIIQWLRTDPYRMQALYTARELGLNQWCLAAGFVRNLVWDQLHGYLSPTPLNDIDLVYFDKKDISEQHDLQLEAL LLNKHMPHKQTVHKQMVHKQTAQKNRFPWSVKNQARMHLHSGRLPYTSTEDAISYWVEIETAIGARLTDEGEIELIAPLG LAALFALTVTLNPKNGELATFDQRVNSKSWLQHWPNLHVVA
Specific function: Unknown
COG id: COG3575
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23235; Mature: 23235
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPHQQIIQWLRTDPYRMQALYTARELGLNQWCLAAGFVRNLVWDQLHGYLSPTPLNDID CCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE LVYFDKKDISEQHDLQLEALLLNKHMPHKQTVHKQMVHKQTAQKNRFPWSVKNQARMHLH EEEECCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEE SGRLPYTSTEDAISYWVEIETAIGARLTDEGEIELIAPLGLAALFALTVTLNPKNGELAT CCCCCCCCCHHHHHHHEEEEHHHCCCCCCCCCEEEECHHHHHHHHHEEEEECCCCCCEEH FDQRVNSKSWLQHWPNLHVVA HHHHCCCHHHHHHCCCEEEEC >Mature Secondary Structure MVPHQQIIQWLRTDPYRMQALYTARELGLNQWCLAAGFVRNLVWDQLHGYLSPTPLNDID CCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE LVYFDKKDISEQHDLQLEALLLNKHMPHKQTVHKQMVHKQTAQKNRFPWSVKNQARMHLH EEEECCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEE SGRLPYTSTEDAISYWVEIETAIGARLTDEGEIELIAPLGLAALFALTVTLNPKNGELAT CCCCCCCCCHHHHHHHEEEEHHHCCCCCCCCCEEEECHHHHHHHHHEEEEECCCCCCEEH FDQRVNSKSWLQHWPNLHVVA HHHHCCCHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA