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The map label for this gene is 153949347

Identifier: 153949347

GI number: 153949347

Start: 4306837

End: 4307082

Strand: Reverse

Name: 153949347

Synonym: YpsIP31758_3824

Alternate gene names: NA

Gene position: 4307082-4306837 (Counterclockwise)

Preceding gene: 153949786

Following gene: 153948722

Centisome position: 91.19

GC content: 50.41

Gene sequence:

>246_bases
ATGAGTAGTGCTCAGGCCGTTGCTGGCTTGTTTCAGGCCACAGAGCCGCCAGTGGGTAACACACAGCAAGTGGCAAAGTT
TACCCAGTTAATGGCGCAGCCAGCGTCAACGGAATTAATGATGACACCAGAATCATTGCTGATGCAGCAGGCTGAATGGA
TGCACGCTTCACTGGCGATAGATTTAACCGCCAAAGTGGCCGGTGTGATGGGGCAGAACATCAATAAATTGGTCAACATG
CAATGA

Upstream 100 bases:

>100_bases
GTGGTTCAGGGGCTGACAAAGTCAAATGACGGGAAACGTGCTGTTAGGGTAACCCTAAGACAGAATTAATTTTTTATTAA
TAGGCGATGATCAGATGAAT

Downstream 100 bases:

>100_bases
AATCTCTGCGGCAGATGTTAGCGATAGTCCTAATGACATTATCCCTTTCCGGTTGTGATATGGAGCTGTATAGCGGGCTG
TCTGAGGGGGAGGCCAATCA

Product: type III secretion apparatus protein, YscI/HrpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASLAIDLTAKVAGVMGQNINKLVNM
Q

Sequences:

>Translated_81_residues
MSSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASLAIDLTAKVAGVMGQNINKLVNM
Q
>Mature_80_residues
SSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASLAIDLTAKVAGVMGQNINKLVNMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8677; Mature: 8546

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.9 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASLAI
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHH
DLTAKVAGVMGQNINKLVNMQ
HHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
SSAQAVAGLFQATEPPVGNTQQVAKFTQLMAQPASTELMMTPESLLMQQAEWMHASLAI
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHH
DLTAKVAGVMGQNINKLVNMQ
HHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA