| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is exuT [H]
Identifier: 153949342
GI number: 153949342
Start: 563869
End: 565170
Strand: Reverse
Name: exuT [H]
Synonym: YpsIP31758_0490
Alternate gene names: 153949342
Gene position: 565170-563869 (Counterclockwise)
Preceding gene: 153949304
Following gene: 153950841
Centisome position: 11.97
GC content: 51.31
Gene sequence:
>1302_bases ATGCGTAAAATTAAAGGGTTACGCTGGTACATGATCGCATTGGTCACCGTCGGTACCATATTAGGTTACTTAACACGTAA TGCCATTGCTGTTGCCGCGCCGACACTGCAAGAACAGTTACATATCACCACCCAGCAATATTCTTATATTATCGCTGCTT ATTCAGCCGCTTATACCCTAATGCAACCAGTAGCCGGTTATGTATTGGACGTTATGGGTACCAAAGTGGGCTATGCCATG TTTGCCGTTATGTGGGCCATATTTTGTATGAGTACCGCCTTGGCCAGCAGTTGGGGTGGATTAGCTATCGCCCGTGGTGC GGTAGGTATGGCAGAGGCGGCTATGATCCCTGCAGGCCTGAAAGCCAGTAGTGAATGGTTCCCGGCCAAAGAGCGTTCTA TTGCGGTAGGCTACTTTAACGTTGGCTCCTCCATCGGCGGTATGATTGCTCCCCCTCTCGTGGTCTGGGCTATCGTGATG CACAGTTGGCAGATGGCATTCATCATTACCGGTGTACTCAGCCTGATTTGGGCCATTGCCTGGTTAATCCTCTACAAACA CCCGAAAGATCAAAAAAGACTCAGCGACGAAGAACGTGAGTACATCCTTAGCGGCCAAGAAGCACAGCACTCCACTGCTA ATGCCAAAAAGATGTCTGCGATGCAGATTATCCGCAACCGTCAATTCTGGGGTATTGCCATCCCGCGTTTCTTGGCAGAA CCCGCTTGGGGGACGTTCAACGCGTGGATTCCGCTCTTCATGTTTAAAGCTTATGGCTTTAACTTGAAAGAGATAGCCAT GTTTGCCTGGATGCCAATGCTGTTTGCTGATGTAGGCTGCATTCTGGGTGGCTACCTGCCGCCACTGTTCCAAAAATACT TTAAGGTTAACCTGATTGTTTCCCGTAAGTTAGTCGTCACTATGGGTGGGGTATTGATGATTGGGCCTGGGACCATCGGC CTATTCACCAGCCCTTATGCGGCTATCGCGCTGCTCTGTATCGGGGGCTTTGCTCACCAAGCACTGTCAGGAGCACTGAT TACATTATCTTCTGACGTTTTTGGCCGTAACGAAGTCGCAACCGCCAACGGCCTGACGGGGATGGCGGCCTGGACGGCCA GTACTCTGTTCGCCCTCGTGGTAGGGGCATTAGCCGATACCATGGGCTTCAGCCCACTGTTTGCTGCACTGGCGGTATTT GATTTACTGGCCGTCGTGGTTATCTGGACCGTGTTACAAGATCGCACAGCAGATGAACCAACGAACGACCCGGTTCAACG GCCGCCGGTTGGACAAAACTGA
Upstream 100 bases:
>100_bases CATGCGCAGCATTGCCGGGTTGGACCAAATTGTGCCATGGAACGCCACCATCAACTGCGTTTCATTGCAGTCATCTTAGA CTGGGAGAAAGTTACACATG
Downstream 100 bases:
>100_bases CCTTACTCTCTGTAATTAAATGACCTGCCTGTGATTAAATGACCTACTAACATGAAAGCCCGGTAAATTTATCGGGCTTT CATCTCTCCTGTTATCCGCA
Product: hexuronate MFS transporter ExuT
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MRKIKGLRWYMIALVTVGTILGYLTRNAIAVAAPTLQEQLHITTQQYSYIIAAYSAAYTLMQPVAGYVLDVMGTKVGYAM FAVMWAIFCMSTALASSWGGLAIARGAVGMAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGGMIAPPLVVWAIVM HSWQMAFIITGVLSLIWAIAWLILYKHPKDQKRLSDEEREYILSGQEAQHSTANAKKMSAMQIIRNRQFWGIAIPRFLAE PAWGTFNAWIPLFMFKAYGFNLKEIAMFAWMPMLFADVGCILGGYLPPLFQKYFKVNLIVSRKLVVTMGGVLMIGPGTIG LFTSPYAAIALLCIGGFAHQALSGALITLSSDVFGRNEVATANGLTGMAAWTASTLFALVVGALADTMGFSPLFAALAVF DLLAVVVIWTVLQDRTADEPTNDPVQRPPVGQN
Sequences:
>Translated_433_residues MRKIKGLRWYMIALVTVGTILGYLTRNAIAVAAPTLQEQLHITTQQYSYIIAAYSAAYTLMQPVAGYVLDVMGTKVGYAM FAVMWAIFCMSTALASSWGGLAIARGAVGMAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGGMIAPPLVVWAIVM HSWQMAFIITGVLSLIWAIAWLILYKHPKDQKRLSDEEREYILSGQEAQHSTANAKKMSAMQIIRNRQFWGIAIPRFLAE PAWGTFNAWIPLFMFKAYGFNLKEIAMFAWMPMLFADVGCILGGYLPPLFQKYFKVNLIVSRKLVVTMGGVLMIGPGTIG LFTSPYAAIALLCIGGFAHQALSGALITLSSDVFGRNEVATANGLTGMAAWTASTLFALVVGALADTMGFSPLFAALAVF DLLAVVVIWTVLQDRTADEPTNDPVQRPPVGQN >Mature_433_residues MRKIKGLRWYMIALVTVGTILGYLTRNAIAVAAPTLQEQLHITTQQYSYIIAAYSAAYTLMQPVAGYVLDVMGTKVGYAM FAVMWAIFCMSTALASSWGGLAIARGAVGMAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGGMIAPPLVVWAIVM HSWQMAFIITGVLSLIWAIAWLILYKHPKDQKRLSDEEREYILSGQEAQHSTANAKKMSAMQIIRNRQFWGIAIPRFLAE PAWGTFNAWIPLFMFKAYGFNLKEIAMFAWMPMLFADVGCILGGYLPPLFQKYFKVNLIVSRKLVVTMGGVLMIGPGTIG LFTSPYAAIALLCIGGFAHQALSGALITLSSDVFGRNEVATANGLTGMAAWTASTLFALVVGALADTMGFSPLFAALAVF DLLAVVVIWTVLQDRTADEPTNDPVQRPPVGQN
Specific function: Aldohexuronate transport system [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=342, Percent_Identity=24.8538011695906, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI148743791, Length=276, Percent_Identity=25.3623188405797, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI154800443, Length=383, Percent_Identity=24.0208877284595, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI2367193, Length=428, Percent_Identity=84.1121495327103, Blast_Score=725, Evalue=0.0, Organism=Escherichia coli, GI87082320, Length=394, Percent_Identity=26.3959390862944, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI2367379, Length=313, Percent_Identity=27.4760383386581, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI1789515, Length=433, Percent_Identity=24.0184757505774, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789152, Length=328, Percent_Identity=24.0853658536585, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI87082071, Length=378, Percent_Identity=20.8994708994709, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17552542, Length=308, Percent_Identity=23.3766233766234, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321698, Length=245, Percent_Identity=21.6326530612245, Blast_Score=63, Evalue=9e-11, Organism=Drosophila melanogaster, GI24641682, Length=166, Percent_Identity=32.5301204819277, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24580790, Length=290, Percent_Identity=25.8620689655172, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI20129235, Length=404, Percent_Identity=23.7623762376238, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24639764, Length=370, Percent_Identity=21.8918918918919, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI45550460, Length=416, Percent_Identity=25.2403846153846, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24655255, Length=364, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573299, Length=402, Percent_Identity=23.6318407960199, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24653727, Length=418, Percent_Identity=23.444976076555, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47011; Mature: 47011
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIKGLRWYMIALVTVGTILGYLTRNAIAVAAPTLQEQLHITTQQYSYIIAAYSAAYTL CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHH MQPVAGYVLDVMGTKVGYAMFAVMWAIFCMSTALASSWGGLAIARGAVGMAEAAMIPAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCC KASSEWFPAKERSIAVGYFNVGSSIGGMIAPPLVVWAIVMHSWQMAFIITGVLSLIWAIA CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLILYKHPKDQKRLSDEEREYILSGQEAQHSTANAKKMSAMQIIRNRQFWGIAIPRFLAE HHHHHCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCC PAWGTFNAWIPLFMFKAYGFNLKEIAMFAWMPMLFADVGCILGGYLPPLFQKYFKVNLIV CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SRKLVVTMGGVLMIGPGTIGLFTSPYAAIALLCIGGFAHQALSGALITLSSDVFGRNEVA HHHHHEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC TANGLTGMAAWTASTLFALVVGALADTMGFSPLFAALAVFDLLAVVVIWTVLQDRTADEP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TNDPVQRPPVGQN CCCCCCCCCCCCC >Mature Secondary Structure MRKIKGLRWYMIALVTVGTILGYLTRNAIAVAAPTLQEQLHITTQQYSYIIAAYSAAYTL CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHH MQPVAGYVLDVMGTKVGYAMFAVMWAIFCMSTALASSWGGLAIARGAVGMAEAAMIPAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCC KASSEWFPAKERSIAVGYFNVGSSIGGMIAPPLVVWAIVMHSWQMAFIITGVLSLIWAIA CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLILYKHPKDQKRLSDEEREYILSGQEAQHSTANAKKMSAMQIIRNRQFWGIAIPRFLAE HHHHHCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCC PAWGTFNAWIPLFMFKAYGFNLKEIAMFAWMPMLFADVGCILGGYLPPLFQKYFKVNLIV CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SRKLVVTMGGVLMIGPGTIGLFTSPYAAIALLCIGGFAHQALSGALITLSSDVFGRNEVA HHHHHEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC TANGLTGMAAWTASTLFALVVGALADTMGFSPLFAALAVFDLLAVVVIWTVLQDRTADEP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TNDPVQRPPVGQN CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]