| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is agaS [H]
Identifier: 153949282
GI number: 153949282
Start: 1125402
End: 1126568
Strand: Reverse
Name: agaS [H]
Synonym: YpsIP31758_0941
Alternate gene names: 153949282
Gene position: 1126568-1125402 (Counterclockwise)
Preceding gene: 153950684
Following gene: 153949725
Centisome position: 23.85
GC content: 47.3
Gene sequence:
>1167_bases ATGACGCAATATTTAGGGTACAGCCGGGAAGAACTGACTCGCTTACATGCCAGTTGGACCGCACAGGAAATTGAACAACA GCCTGCATGTTGGGGAAAAACACAGCGTATTGTGGAAGAGAGTCAGGCAGCGATTAATGATTTTCTGCATCAGGCATTAG CCGCGAGTAACACGCGGATTATTTTTACCGGTGCTGGAACCTCAGCCTTTGCCGGGCGGGCGCTGGCTCCGCTGTTAGCA CCTTATCTGTCCCATCGGATTGAAGCGATTGCGACAACGGATTTGGTGGCAACACCAGAACAATATTTCTCCGAAGATAT TCCGACGCTGCTGGTTTCATTTGCCCGTTCCGGCAACAGCCCGGAAAGTGTGGCTGCGTTACAAGTGGCATCGGCCTGTT TATCTCGCTGTTTCCACTTGGTATTGACCTGTAACCAGGGCGGCCAGTTATATCAATATTGCCAGACGGCACCAGGTGCA TTGGCCGTGCTGATGCCAGCAGAAACCAATGACCAATCACTGGCGATGACCTCCAGTTTCTCCTCCATGATGATGGCTGC GATGGCTATTTTTGCTGGAATTGATAAGTATTCGAAAGAAATTGAAAGATTTTGTAAGGGATCTGCGGATTGGTTCAAAG AAATTAATCATAAAATCATCGATAATACTAAAAGTTCGCAATACCAAAGGGTTATCTACTTAGGTAGTGGCGGACTACAG GGGCTGGCCCAAGAGTCAGCACTGAAATTACTCGAATTAACCGCAGGTAAAGTTGTGGCTACTTTTGATACTCCGTTGGG ATTCCGCCATGGTCCGAAATCAATCGTTAATCCGGACACTTTGGTTGTTGTTTACATCTCTAATGATCCCTACACGCGTC AATATGATCTCGACCTGTTAGCTGAGATCCGCGCCAACAACGTTGCCGGTAAGGTTATCGCTATCGCAGCACAATCAGAT GCTTATGTCACAGCTGGTGACCATGTTCTGGTACCTGGTATGGCAGAAAGTTCTGACTTAGGCCTGCTGTTTGCCTATCT GATGTTTGCACAATCCTTCGCTTTTCATAGCTCAGTTGCCTTAAACAACACGCCGGATAGCCCATCTCCAACGGGTGAAA TCAATCGCGTGGTGCAAGGTGTGACTATTTATCCATTTAAAAAATAA
Upstream 100 bases:
>100_bases CTCTGTCTTTTGAAGCCACGGCATTGGTCAAACAACAAATCAAAAATACGCTTATTGGCTATGTCAATGCATGCCACCTT TTTAACGGGAACACATCGAA
Downstream 100 bases:
>100_bases CACACAGGAATATCCCTATGACTCGGCCAAATATCGTCTGGACTCGTATTGATGAGCGTTTACTTCATGGACAGATCCGC ATTACCTGGGGAAAGCACAC
Product: tagatose-6-phosphate ketose/aldose isomerase AgaS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTQYLGYSREELTRLHASWTAQEIEQQPACWGKTQRIVEESQAAINDFLHQALAASNTRIIFTGAGTSAFAGRALAPLLA PYLSHRIEAIATTDLVATPEQYFSEDIPTLLVSFARSGNSPESVAALQVASACLSRCFHLVLTCNQGGQLYQYCQTAPGA LAVLMPAETNDQSLAMTSSFSSMMMAAMAIFAGIDKYSKEIERFCKGSADWFKEINHKIIDNTKSSQYQRVIYLGSGGLQ GLAQESALKLLELTAGKVVATFDTPLGFRHGPKSIVNPDTLVVVYISNDPYTRQYDLDLLAEIRANNVAGKVIAIAAQSD AYVTAGDHVLVPGMAESSDLGLLFAYLMFAQSFAFHSSVALNNTPDSPSPTGEINRVVQGVTIYPFKK
Sequences:
>Translated_388_residues MTQYLGYSREELTRLHASWTAQEIEQQPACWGKTQRIVEESQAAINDFLHQALAASNTRIIFTGAGTSAFAGRALAPLLA PYLSHRIEAIATTDLVATPEQYFSEDIPTLLVSFARSGNSPESVAALQVASACLSRCFHLVLTCNQGGQLYQYCQTAPGA LAVLMPAETNDQSLAMTSSFSSMMMAAMAIFAGIDKYSKEIERFCKGSADWFKEINHKIIDNTKSSQYQRVIYLGSGGLQ GLAQESALKLLELTAGKVVATFDTPLGFRHGPKSIVNPDTLVVVYISNDPYTRQYDLDLLAEIRANNVAGKVIAIAAQSD AYVTAGDHVLVPGMAESSDLGLLFAYLMFAQSFAFHSSVALNNTPDSPSPTGEINRVVQGVTIYPFKK >Mature_387_residues TQYLGYSREELTRLHASWTAQEIEQQPACWGKTQRIVEESQAAINDFLHQALAASNTRIIFTGAGTSAFAGRALAPLLAP YLSHRIEAIATTDLVATPEQYFSEDIPTLLVSFARSGNSPESVAALQVASACLSRCFHLVLTCNQGGQLYQYCQTAPGAL AVLMPAETNDQSLAMTSSFSSMMMAAMAIFAGIDKYSKEIERFCKGSADWFKEINHKIIDNTKSSQYQRVIYLGSGGLQG LAQESALKLLELTAGKVVATFDTPLGFRHGPKSIVNPDTLVVVYISNDPYTRQYDLDLLAEIRANNVAGKVIAIAAQSDA YVTAGDHVLVPGMAESSDLGLLFAYLMFAQSFAFHSSVALNNTPDSPSPTGEINRVVQGVTIYPFKK
Specific function: May be a tagatose-6-phosphate ketose/aldose isomerase [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Escherichia coli, GI1789525, Length=374, Percent_Identity=48.6631016042781, Blast_Score=361, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001347 - InterPro: IPR014180 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: 5.-.-.- [C]
Molecular weight: Translated: 42048; Mature: 41917
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQYLGYSREELTRLHASWTAQEIEQQPACWGKTQRIVEESQAAINDFLHQALAASNTRI CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE IFTGAGTSAFAGRALAPLLAPYLSHRIEAIATTDLVATPEQYFSEDIPTLLVSFARSGNS EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC PESVAALQVASACLSRCFHLVLTCNQGGQLYQYCQTAPGALAVLMPAETNDQSLAMTSSF HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCEEEEEEECCCCCCCEEHHHHH SSMMMAAMAIFAGIDKYSKEIERFCKGSADWFKEINHKIIDNTKSSQYQRVIYLGSGGLQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC GLAQESALKLLELTAGKVVATFDTPLGFRHGPKSIVNPDTLVVVYISNDPYTRQYDLDLL HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECHHHH AEIRANNVAGKVIAIAAQSDAYVTAGDHVLVPGMAESSDLGLLFAYLMFAQSFAFHSSVA HHHHCCCCCCEEEEEEECCCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEE LNNTPDSPSPTGEINRVVQGVTIYPFKK ECCCCCCCCCCHHHHHHHCCCEEECCCC >Mature Secondary Structure TQYLGYSREELTRLHASWTAQEIEQQPACWGKTQRIVEESQAAINDFLHQALAASNTRI CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE IFTGAGTSAFAGRALAPLLAPYLSHRIEAIATTDLVATPEQYFSEDIPTLLVSFARSGNS EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC PESVAALQVASACLSRCFHLVLTCNQGGQLYQYCQTAPGALAVLMPAETNDQSLAMTSSF HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCCEEEEEEECCCCCCCEEHHHHH SSMMMAAMAIFAGIDKYSKEIERFCKGSADWFKEINHKIIDNTKSSQYQRVIYLGSGGLQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC GLAQESALKLLELTAGKVVATFDTPLGFRHGPKSIVNPDTLVVVYISNDPYTRQYDLDLL HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECHHHH AEIRANNVAGKVIAIAAQSDAYVTAGDHVLVPGMAESSDLGLLFAYLMFAQSFAFHSSVA HHHHCCCCCCEEEEEEECCCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEE LNNTPDSPSPTGEINRVVQGVTIYPFKK ECCCCCCCCCCHHHHHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 8932697 [H]