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The map label for this gene is fliM [H]

Identifier: 153949279

GI number: 153949279

Start: 2603107

End: 2604108

Strand: Direct

Name: fliM [H]

Synonym: YpsIP31758_2299

Alternate gene names: 153949279

Gene position: 2603107-2604108 (Clockwise)

Preceding gene: 153947506

Following gene: 153948620

Centisome position: 55.11

GC content: 50.4

Gene sequence:

>1002_bases
ATGGGCGATAGCATTCTTTCACAAGCAGAGATTGATGCACTGTTAAATGGCGATAGCGGGAGTGAAGAACCCGTGGTAAT
CACCGCCAATGAGACAGACGTCAAACCTTACGATCCGACGACCCAGCGACGTGTGGTGCGTGAACGCCTACACGCGTTGG
AGATCATCAACGAGCGTTTTGCCCGCCAGTTCCGTATGGGGTTGTTTAACCTATTGCGCCGTAGCCCAGACATCACGGTC
GGCCCGATAAAAATTCAGCCTTATCACGACTTTGCCCGCAATCTGCCAGTGCCAACCAACCTTAATCTGGTGCATCTAAA
ACCGCTACGCGGTACTGCGCTATTCGTGTTTGCCCCCAGTTTGGTGTTTATTGCGGTCGATAACCTGTTTGGCGGGGATG
GCCGTTTTCCAACGAAAGTGGAAGGTCGTGAATTTACCCATACCGAGCAACGGGTTATCACCCGAATGTTGCGGTTGGCG
TTGGATGCTTACCGTGATGCCTGGGCGGCCATCTATAAAATCGATGTGGAATATGTTCGCTCAGAAATACAGGTGAAATT
TACCAATATCACCACCTCCCCCAATGACATCGTGGTGAGCACGCCTTTTCAGGTGGAGATAGGCACCCTGAGCGGTGAGT
TTAATATCTGTATTCCCTTCGCCATGATCGAGCCCCTGCGCGAACTGTTGACCAATCCACCGTTGGAGAACTCCCGTCAG
GAAGATAACTACTGGCGCGAAACCTTAGTGAAGCAAGTTCAGCATTCGGAGCTGGAATTGGTGGCTAATTTTGTTGATAT
CCCTCTGCGATTGTCACAGATCCTAAAACTACAGCCGGGGGATGTGTTACCGATAGAGAAACCGGACCGACTGATTGGTC
ACGTCGATGGCGTACCGGTACTAACCAGTCAATACGGGACATTAAACGGGCAATATGCCCTGCGTGTTGAACATTTGATT
AACCCTATTTTGAATGCTCTGAGTGAGGAACAGCCCAAATGA

Upstream 100 bases:

>100_bases
ATGACATTAAAAACATACTTAGCCCGCCAATGGTTAAAGGCCAACCTAATCAGGTGATCAGCGATGTGCTGTTTACCGCA
TTCATATTGCGATAATCATT

Downstream 100 bases:

>100_bases
GTGACCCTAAGTTTCCGTCTGCTGATGGAAAGGAATCCGTGGACGATCTGTGGGCTGATGCGTTTAATGAGCAGCAAGCA
ACAGAAAAACCCACGGCCAC

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MGDSILSQAEIDALLNGDSGSEEPVVITANETDVKPYDPTTQRRVVRERLHALEIINERFARQFRMGLFNLLRRSPDITV
GPIKIQPYHDFARNLPVPTNLNLVHLKPLRGTALFVFAPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVITRMLRLA
LDAYRDAWAAIYKIDVEYVRSEIQVKFTNITTSPNDIVVSTPFQVEIGTLSGEFNICIPFAMIEPLRELLTNPPLENSRQ
EDNYWRETLVKQVQHSELELVANFVDIPLRLSQILKLQPGDVLPIEKPDRLIGHVDGVPVLTSQYGTLNGQYALRVEHLI
NPILNALSEEQPK

Sequences:

>Translated_333_residues
MGDSILSQAEIDALLNGDSGSEEPVVITANETDVKPYDPTTQRRVVRERLHALEIINERFARQFRMGLFNLLRRSPDITV
GPIKIQPYHDFARNLPVPTNLNLVHLKPLRGTALFVFAPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVITRMLRLA
LDAYRDAWAAIYKIDVEYVRSEIQVKFTNITTSPNDIVVSTPFQVEIGTLSGEFNICIPFAMIEPLRELLTNPPLENSRQ
EDNYWRETLVKQVQHSELELVANFVDIPLRLSQILKLQPGDVLPIEKPDRLIGHVDGVPVLTSQYGTLNGQYALRVEHLI
NPILNALSEEQPK
>Mature_332_residues
GDSILSQAEIDALLNGDSGSEEPVVITANETDVKPYDPTTQRRVVRERLHALEIINERFARQFRMGLFNLLRRSPDITVG
PIKIQPYHDFARNLPVPTNLNLVHLKPLRGTALFVFAPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVITRMLRLAL
DAYRDAWAAIYKIDVEYVRSEIQVKFTNITTSPNDIVVSTPFQVEIGTLSGEFNICIPFAMIEPLRELLTNPPLENSRQE
DNYWRETLVKQVQHSELELVANFVDIPLRLSQILKLQPGDVLPIEKPDRLIGHVDGVPVLTSQYGTLNGQYALRVEHLIN
PILNALSEEQPK

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=334, Percent_Identity=83.2335329341317, Blast_Score=577, Evalue=1e-166,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37724; Mature: 37593

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDSILSQAEIDALLNGDSGSEEPVVITANETDVKPYDPTTQRRVVRERLHALEIINERF
CCCHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARQFRMGLFNLLRRSPDITVGPIKIQPYHDFARNLPVPTNLNLVHLKPLRGTALFVFAPS
HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCC
LVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVITRMLRLALDAYRDAWAAIYKIDVEYVR
EEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEIQVKFTNITTSPNDIVVSTPFQVEIGTLSGEFNICIPFAMIEPLRELLTNPPLENSRQ
CEEEEEEEEEECCCCCEEEECCCEEEEEEECCCEEEEEHHHHHHHHHHHHCCCCCCCCCC
EDNYWRETLVKQVQHSELELVANFVDIPLRLSQILKLQPGDVLPIEKPDRLIGHVDGVPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCE
LTSQYGTLNGQYALRVEHLINPILNALSEEQPK
EECCCCCCCCEEEEEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GDSILSQAEIDALLNGDSGSEEPVVITANETDVKPYDPTTQRRVVRERLHALEIINERF
CCHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARQFRMGLFNLLRRSPDITVGPIKIQPYHDFARNLPVPTNLNLVHLKPLRGTALFVFAPS
HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCC
LVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVITRMLRLALDAYRDAWAAIYKIDVEYVR
EEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEIQVKFTNITTSPNDIVVSTPFQVEIGTLSGEFNICIPFAMIEPLRELLTNPPLENSRQ
CEEEEEEEEEECCCCCEEEECCCEEEEEEECCCEEEEEHHHHHHHHHHHHCCCCCCCCCC
EDNYWRETLVKQVQHSELELVANFVDIPLRLSQILKLQPGDVLPIEKPDRLIGHVDGVPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCE
LTSQYGTLNGQYALRVEHLINPILNALSEEQPK
EECCCCCCCCEEEEEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3519573; 9097040; 9278503; 2651416 [H]