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The map label for this gene is yhbH [H]

Identifier: 153949248

GI number: 153949248

Start: 516868

End: 517155

Strand: Reverse

Name: yhbH [H]

Synonym: YpsIP31758_0440

Alternate gene names: 153949248

Gene position: 517155-516868 (Counterclockwise)

Preceding gene: 153949825

Following gene: 153947248

Centisome position: 10.95

GC content: 37.85

Gene sequence:

>288_bases
ATGCAGCTCAATATTACCGGTCATCATGTCGAAATAACCGAAGCATTACGCGAGTTTGTTACCACAAAATTTGCCAAACT
TGAGCAATATTTTGATCGAATTAACCAAGTATATGTGGTTCTAAGTGTCGAAAAAGTAAAACAAATTGCAGAAGCAACGG
TACATGTGAATGGAGGCGAGTTGCACGCAAGCTCGGAACAAGAAGATATGTATGCAGCAATTGATATTTTGGTTGATAAA
CTGGCTCGCCAGTTGAACAAGCATAAAGATAAATTGAAACAACATTAG

Upstream 100 bases:

>100_bases
TAGCACGGCGCACCGTCGCAAAATACCGAGAGTCGTTATCCATCCCTCCGTCTAATCAACGTAAACAGTTGGTTTGACCT
GAACTGAGAAGGAATAGACT

Downstream 100 bases:

>100_bases
AAGCCCTTGTTGCTGTTATTACTCAGCAAAGGTTCTACACTCGCTACATAGCCAGATACCGGTGGATATTTATTCCCACC
GGTATCTGGCGTAAACAGCG

Product: sigma(54) modulation protein

Products: NA

Alternate protein names: ORF3; ORF95 [H]

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MQLNITGHHVEITEALREFVTTKFAKLEQYFDRINQVYVVLSVEKVKQIAEATVHVNGGELHASSEQEDMYAAIDILVDK
LARQLNKHKDKLKQH

Sequences:

>Translated_95_residues
MQLNITGHHVEITEALREFVTTKFAKLEQYFDRINQVYVVLSVEKVKQIAEATVHVNGGELHASSEQEDMYAAIDILVDK
LARQLNKHKDKLKQH
>Mature_95_residues
MQLNITGHHVEITEALREFVTTKFAKLEQYFDRINQVYVVLSVEKVKQIAEATVHVNGGELHASSEQEDMYAAIDILVDK
LARQLNKHKDKLKQH

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=95, Percent_Identity=82.1052631578947, Blast_Score=162, Evalue=6e-42,
Organism=Escherichia coli, GI1788949, Length=87, Percent_Identity=43.6781609195402, Blast_Score=75, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 10943; Mature: 10943

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNITGHHVEITEALREFVTTKFAKLEQYFDRINQVYVVLSVEKVKQIAEATVHVNGGE
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCE
LHASSEQEDMYAAIDILVDKLARQLNKHKDKLKQH
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLNITGHHVEITEALREFVTTKFAKLEQYFDRINQVYVVLSVEKVKQIAEATVHVNGGE
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCE
LHASSEQEDMYAAIDILVDKLARQLNKHKDKLKQH
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]