| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949236
Identifier: 153949236
GI number: 153949236
Start: 298696
End: 299565
Strand: Direct
Name: 153949236
Synonym: YpsIP31758_0267
Alternate gene names: NA
Gene position: 298696-299565 (Clockwise)
Preceding gene: 153946882
Following gene: 153950844
Centisome position: 6.32
GC content: 46.55
Gene sequence:
>870_bases ATGACGACCTTCTCTCATCCCTCCCTGATCCCACTGGATGGCGGTATTAACTTTCGTGATCTCGGGGGTAACCTTGCCGC TGATGGCCGGCGGATAAAGCCCGGCTTGTTATTTCGTTCCGGTTCGCTTGATCGCTTGAGTACCAACGATTGTGATTTTC TCAGTCACAGTAACGTTACCCAAATTATTGATTACCGTGATGCCGATGAAGTACAGGCTAAGCCAGATGTTTTATGGCCG GGTGCCCACTATCACAATATACCGGCCAACCCGCTCAGTAGTGAGGTGAATGCCAATCTGGAAAAATTGACTAACGAGAC ATTAGCCACATTTGATGTCCGTGCCTTTATGTTCGAGCTTTATCACCGCTTACCTTTTAATAGCTTGGCTTATCAGCAAT TGGTCAATTTATTGCAAAATTGTGCATCAACGGACCCTGTCGCTAGCAGCGTTGTGCATAGTGGCGATGTGGTACATGGC GATGTGGTACATAGCGATGTGGTACATAGAGGTATTGTACATAGAGGTATTGTACAGCACTGTGCGGTTGGAAAAGACCG CACGGGTGTAGGTGCTGCGTTGGTACTGTTTGCTTTGGGGGCTGATGAATCTACTGTGCTGGAAGATTATCTGTTGACGG AAACCACCCTGAAGCCTTTTCGTGAGCATATGCTGGCTGAATTGGCACTAAAACTGAATGATCAGGCTCTGGCGCAATTT ACATTTGTTCTCTCTGCCAGAGAAGAGTTTATTCAAACTGCTCTGCGGAGCATTCATGATCGTTATGGAAGCAGGGAGCG TTGGTTAAAGCATGAGTTCGGTCTTGGCAGTATTGAGCGAGAAAAACTACAGTCTTATTTTTTAGAGTAA
Upstream 100 bases:
>100_bases TTGTTCTCGGGTCAGTTTACTGGCCCGTTCTTTATTTCATCTGATTATCTGATAAGGTCACAGCTCTTATAACGAACAAT AATAAGAGGAAAATATGACG
Downstream 100 bases:
>100_bases CGGGTTATTTTTTATGGCATTCGTTTTTTAGCATAATGAGTTACCTCTTGCCTTTTATTTCTTGGCCTAGGCGAAGAGTT GGGGTCGGTACCCCCGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-Tyrosine Phosphatase; Protein Tyrosine Phosphatase; Tyrosine Specific Protein Phosphatase
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVLWP GAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHG DVVHSDVVHRGIVHRGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQF TFVLSAREEFIQTALRSIHDRYGSRERWLKHEFGLGSIEREKLQSYFLE
Sequences:
>Translated_289_residues MTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVLWP GAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHG DVVHSDVVHRGIVHRGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQF TFVLSAREEFIQTALRSIHDRYGSRERWLKHEFGLGSIEREKLQSYFLE >Mature_288_residues TTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVLWPG AHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHGD VVHSDVVHRGIVHRGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFT FVLSAREEFIQTALRSIHDRYGSRERWLKHEFGLGSIEREKLQSYFLE
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32223; Mature: 32092
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVT CCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHH QIIDYRDADEVQAKPDVLWPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFEL HHHCCCCCHHHCCCCCEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHH YHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHGDVVHSDVVHRGIVHRGIVQH HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHH CAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQF HHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TFVLSAREEFIQTALRSIHDRYGSRERWLKHEFGLGSIEREKLQSYFLE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure TTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVT CCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHH QIIDYRDADEVQAKPDVLWPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFEL HHHCCCCCHHHCCCCCEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHH YHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHGDVVHSDVVHRGIVHRGIVQH HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHH CAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQF HHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TFVLSAREEFIQTALRSIHDRYGSRERWLKHEFGLGSIEREKLQSYFLE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA