| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949209
Identifier: 153949209
GI number: 153949209
Start: 2847134
End: 2847574
Strand: Reverse
Name: 153949209
Synonym: YpsIP31758_2514
Alternate gene names: NA
Gene position: 2847574-2847134 (Counterclockwise)
Preceding gene: 153948064
Following gene: 153950570
Centisome position: 60.29
GC content: 37.41
Gene sequence:
>441_bases ATGTCTAATCCCAATAGAAATCTATTTCTTGGCCGTTGGAAACTTGAGTCCTGTATTGGTAACAGTGGAGGTATACATAT TTACCCTATAGGTAGGGAGCCGTTTGGTATGTTGATCTATACCGAACAGTACATGATGGTGTTTATTTCATCGGTAGAGA GAACTCAATTTAGCACGGAGGATATTCGTGCGATCCCGTCAGAACAGATCGTGGCAGATTTTCCTAAATTTGAAACATAT TGTGGCCATTATATTGTTAATCACGATGAGAAAATCGTTACGCACTTTATTGATAACAGTAAAATCCCCAATCAAATTGG TACCCAGTTTCGCCGATATTTTAGTTTTGAGCATGAGAAACTAGTTCTTAAATCCATAGATAGTCTATTGCTTAATGACG AATCGTGGTTGTTTGAGCTTGTTTGGAATAAACAGGAATAA
Upstream 100 bases:
>100_bases TTATTGAGAAATAATGAGGGGGACTTCATCGCCATTATGAATATTGAGCTGAGCGACCACTTGGTATTTTCACTGTATTT TGACCAAAAAGGTATTAGTC
Downstream 100 bases:
>100_bases GCATGAATTTATTAATTAACCAAGCGGAGATAATATTATGGATAGAGATCATATTGCTAGCATTGTAAAAAAACACATTG TTAATTCAATCGATGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSNPNRNLFLGRWKLESCIGNSGGIHIYPIGREPFGMLIYTEQYMMVFISSVERTQFSTEDIRAIPSEQIVADFPKFETY CGHYIVNHDEKIVTHFIDNSKIPNQIGTQFRRYFSFEHEKLVLKSIDSLLLNDESWLFELVWNKQE
Sequences:
>Translated_146_residues MSNPNRNLFLGRWKLESCIGNSGGIHIYPIGREPFGMLIYTEQYMMVFISSVERTQFSTEDIRAIPSEQIVADFPKFETY CGHYIVNHDEKIVTHFIDNSKIPNQIGTQFRRYFSFEHEKLVLKSIDSLLLNDESWLFELVWNKQE >Mature_145_residues SNPNRNLFLGRWKLESCIGNSGGIHIYPIGREPFGMLIYTEQYMMVFISSVERTQFSTEDIRAIPSEQIVADFPKFETYC GHYIVNHDEKIVTHFIDNSKIPNQIGTQFRRYFSFEHEKLVLKSIDSLLLNDESWLFELVWNKQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17216; Mature: 17085
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPNRNLFLGRWKLESCIGNSGGIHIYPIGREPFGMLIYTEQYMMVFISSVERTQFSTE CCCCCCCEEEEEEEHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCH DIRAIPSEQIVADFPKFETYCGHYIVNHDEKIVTHFIDNSKIPNQIGTQFRRYFSFEHEK HHHCCCCCHHHHCCCCHHHHHCCEEECCCHHEEHHHHCCCCCCHHHHHHHHHHHCCCHHH LVLKSIDSLLLNDESWLFELVWNKQE HHHHHHHHHHCCCCCEEEEEEECCCC >Mature Secondary Structure SNPNRNLFLGRWKLESCIGNSGGIHIYPIGREPFGMLIYTEQYMMVFISSVERTQFSTE CCCCCCEEEEEEEHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCH DIRAIPSEQIVADFPKFETYCGHYIVNHDEKIVTHFIDNSKIPNQIGTQFRRYFSFEHEK HHHCCCCCHHHHCCCCHHHHHCCEEECCCHHEEHHHHCCCCCCHHHHHHHHHHHCCCHHH LVLKSIDSLLLNDESWLFELVWNKQE HHHHHHHHHHCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA