| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is hpaX [H]
Identifier: 153949197
GI number: 153949197
Start: 2658018
End: 2659385
Strand: Reverse
Name: hpaX [H]
Synonym: YpsIP31758_2358
Alternate gene names: 153949197
Gene position: 2659385-2658018 (Counterclockwise)
Preceding gene: 153948795
Following gene: 153948091
Centisome position: 56.3
GC content: 49.2
Gene sequence:
>1368_bases ATGAGCGATTCACTGTCTACCGCACCGGGCGTTACCCCGCCGGTCAATAAAAACACACCATTAAGTGCGCAGCAGCAGTC CGTCATTAATAAACTGTTTCGCCGTCTGATCCCGTTCTTATTCTTGTTGTTTGTTTTTGCCTTCCTTGATCGTATCAATA TTGGTTTTGCGGGTTTGACGATGGGGAAGGATTTAGGGCTAAGTGCCACGACCTTTGGTTTAGCGACTACATTATTCTAC GTGACATATATCTTATTCGCGATCCCCAGCAATATCATGTTGGGGATCGTGGGTGCCAGGCGTTGGATTGCGACCATTAT GGTGCTCTGGGGTATCGCCTCTACCGCGACCTTATTTGCCGTCGGCCCCAACAGTTTGTATCTCTTACGAATGATTGTTG GGATCACCGAAGCCGGTTTTTTACCCGGCATTCTGGTGTATTTAACTTATTGGTTTCCGGCCCACTTTCGAGCCAGAGCC AATGCGCTGTTTATGGTGGCGATGCCAGTGACTATGGCGCTCGGCTCTCTGGTTTCCGGCTATATTTTGGCGCTTGATGG TTTTTTGAATATGCGTGGTTGGCAGTGGCTATTTCTGCTGGAAGGCTTTCCATCGGTCTTGCTGGGGGGGGTGGTCTGGT TCTATCTGGACGATACCCCGCAGAAAGCGCGCTGGTTAACGAAAGAAGATAAACAGTGTCTGCAAGAGATGCTGGAGAGT GACCGTTTGCAATTGGCGAAACAGGCGGATTATGGTGCCTTACCACAATCAGGGATGTGGCGGGAAATTTTCACCCCCGT GGTGCTGATGTATACACTGGCTTACTTCTGTTTAACCAATACCCTAAGTGCGGTGAATATTTGGACGCCGCAGATCCTGC AAAGTTTTAATCAGAGCAGCAGCAATATCACTATCGGTCTGCTGGCCGCTATCCCACAAGTTTGTACCATTGCCGGCATG ATCTGGTGGAGTAGACGCTCGGATCGGGTTCAGGAACGCAAAATGCACACGGTTTTGCCGTATCTGTTTGCCGCAGCGGG GTGGGTGCTGGCATCGGCCACACAAAATAGCGTAATCCAGTTGTTAGGGATCATTATGGCCTCGACCGGGTCATTTACGG CGATGGCGATTTTCTGGACTACACCGGATCAATCCATCAGCCTGAGAGCCAGAGCTGTTGGTATTGCAGTGATAAATGCC ACTGGAAATATTGGTTCGGCTGTCAGCCCGGTTTTAATTGGTTGGTTGAAAGACCAGACCGGTAACTTTAATTCCGGGCT GTATTTCGTTGCCGGTTTATTGGTTATCGGGGCTGTTATTTTCTTGATGATTCCAATGAAAAAGGCACCTCCAAAAGCCA TTTTCTAA
Upstream 100 bases:
>100_bases ACAGCCGAGGCACTGGCAGCCCGCTTCGGTGTGGGTAATCATCATCCACCGCTTGCACCATCGGGTGGATATTAACCCTG TCCGTATCGAGGACATTATC
Downstream 100 bases:
>100_bases TGGGCTAAGGGACCCATGCCGACAAGAATGTCAGCGAGCCGGTCTTTATTTTGATGACGAGGTAAATATGAAGCCAGAAA ATTTCCGAGCGAATAACCAA
Product: 4-hydroxyphenylacetate permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSDSLSTAPGVTPPVNKNTPLSAQQQSVINKLFRRLIPFLFLLFVFAFLDRINIGFAGLTMGKDLGLSATTFGLATTLFY VTYILFAIPSNIMLGIVGARRWIATIMVLWGIASTATLFAVGPNSLYLLRMIVGITEAGFLPGILVYLTYWFPAHFRARA NALFMVAMPVTMALGSLVSGYILALDGFLNMRGWQWLFLLEGFPSVLLGGVVWFYLDDTPQKARWLTKEDKQCLQEMLES DRLQLAKQADYGALPQSGMWREIFTPVVLMYTLAYFCLTNTLSAVNIWTPQILQSFNQSSSNITIGLLAAIPQVCTIAGM IWWSRRSDRVQERKMHTVLPYLFAAAGWVLASATQNSVIQLLGIIMASTGSFTAMAIFWTTPDQSISLRARAVGIAVINA TGNIGSAVSPVLIGWLKDQTGNFNSGLYFVAGLLVIGAVIFLMIPMKKAPPKAIF
Sequences:
>Translated_455_residues MSDSLSTAPGVTPPVNKNTPLSAQQQSVINKLFRRLIPFLFLLFVFAFLDRINIGFAGLTMGKDLGLSATTFGLATTLFY VTYILFAIPSNIMLGIVGARRWIATIMVLWGIASTATLFAVGPNSLYLLRMIVGITEAGFLPGILVYLTYWFPAHFRARA NALFMVAMPVTMALGSLVSGYILALDGFLNMRGWQWLFLLEGFPSVLLGGVVWFYLDDTPQKARWLTKEDKQCLQEMLES DRLQLAKQADYGALPQSGMWREIFTPVVLMYTLAYFCLTNTLSAVNIWTPQILQSFNQSSSNITIGLLAAIPQVCTIAGM IWWSRRSDRVQERKMHTVLPYLFAAAGWVLASATQNSVIQLLGIIMASTGSFTAMAIFWTTPDQSISLRARAVGIAVINA TGNIGSAVSPVLIGWLKDQTGNFNSGLYFVAGLLVIGAVIFLMIPMKKAPPKAIF >Mature_454_residues SDSLSTAPGVTPPVNKNTPLSAQQQSVINKLFRRLIPFLFLLFVFAFLDRINIGFAGLTMGKDLGLSATTFGLATTLFYV TYILFAIPSNIMLGIVGARRWIATIMVLWGIASTATLFAVGPNSLYLLRMIVGITEAGFLPGILVYLTYWFPAHFRARAN ALFMVAMPVTMALGSLVSGYILALDGFLNMRGWQWLFLLEGFPSVLLGGVVWFYLDDTPQKARWLTKEDKQCLQEMLESD RLQLAKQADYGALPQSGMWREIFTPVVLMYTLAYFCLTNTLSAVNIWTPQILQSFNQSSSNITIGLLAAIPQVCTIAGMI WWSRRSDRVQERKMHTVLPYLFAAAGWVLASATQNSVIQLLGIIMASTGSFTAMAIFWTTPDQSISLRARAVGIAVINAT GNIGSAVSPVLIGWLKDQTGNFNSGLYFVAGLLVIGAVIFLMIPMKKAPPKAIF
Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Escherichia coli, GI87082071, Length=427, Percent_Identity=31.8501170960187, Blast_Score=216, Evalue=4e-57, Organism=Escherichia coli, GI1789515, Length=440, Percent_Identity=25.4545454545455, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082320, Length=441, Percent_Identity=21.5419501133787, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789152, Length=447, Percent_Identity=21.4765100671141, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI2367379, Length=446, Percent_Identity=23.0941704035874, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322025, Length=410, Percent_Identity=24.6341463414634, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6321698, Length=226, Percent_Identity=25.2212389380531, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49993; Mature: 49862
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLSTAPGVTPPVNKNTPLSAQQQSVINKLFRRLIPFLFLLFVFAFLDRINIGFAGLT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE MGKDLGLSATTFGLATTLFYVTYILFAIPSNIMLGIVGARRWIATIMVLWGIASTATLFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE VGPNSLYLLRMIVGITEAGFLPGILVYLTYWFPAHFRARANALFMVAMPVTMALGSLVSG ECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH YILALDGFLNMRGWQWLFLLEGFPSVLLGGVVWFYLDDTPQKARWLTKEDKQCLQEMLES HHHHHHHHHCCCCCEEEEEHHCCHHHHHHHEEEEEECCCCHHHHHCCHHHHHHHHHHHHH DRLQLAKQADYGALPQSGMWREIFTPVVLMYTLAYFCLTNTLSAVNIWTPQILQSFNQSS HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCC SNITIGLLAAIPQVCTIAGMIWWSRRSDRVQERKMHTVLPYLFAAAGWVLASATQNSVIQ CCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LLGIIMASTGSFTAMAIFWTTPDQSISLRARAVGIAVINATGNIGSAVSPVLIGWLKDQT HHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCC GNFNSGLYFVAGLLVIGAVIFLMIPMKKAPPKAIF CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SDSLSTAPGVTPPVNKNTPLSAQQQSVINKLFRRLIPFLFLLFVFAFLDRINIGFAGLT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE MGKDLGLSATTFGLATTLFYVTYILFAIPSNIMLGIVGARRWIATIMVLWGIASTATLFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE VGPNSLYLLRMIVGITEAGFLPGILVYLTYWFPAHFRARANALFMVAMPVTMALGSLVSG ECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH YILALDGFLNMRGWQWLFLLEGFPSVLLGGVVWFYLDDTPQKARWLTKEDKQCLQEMLES HHHHHHHHHCCCCCEEEEEHHCCHHHHHHHEEEEEECCCCHHHHHCCHHHHHHHHHHHHH DRLQLAKQADYGALPQSGMWREIFTPVVLMYTLAYFCLTNTLSAVNIWTPQILQSFNQSS HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCC SNITIGLLAAIPQVCTIAGMIWWSRRSDRVQERKMHTVLPYLFAAAGWVLASATQNSVIQ CCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LLGIIMASTGSFTAMAIFWTTPDQSISLRARAVGIAVINATGNIGSAVSPVLIGWLKDQT HHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCC GNFNSGLYFVAGLLVIGAVIFLMIPMKKAPPKAIF CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]