| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is yeaQ [H]
Identifier: 153949130
GI number: 153949130
Start: 3165465
End: 3165713
Strand: Reverse
Name: yeaQ [H]
Synonym: YpsIP31758_2800
Alternate gene names: 153949130
Gene position: 3165713-3165465 (Counterclockwise)
Preceding gene: 153948716
Following gene: 153948999
Centisome position: 67.02
GC content: 43.78
Gene sequence:
>249_bases ATGGGCATACTATCTTGGATTATTTTTGGCCTTATAGCCGGTATTTTGGCGAAGTGGATTATGCCTGGTGAGGATGGGGG TGGATTTATCATGACCATCATCTTGGGTATTATTGGTGCATTGGTCGGGGGCTATATCAGCACTTTCTTTGGAATGGGAA GAGTTGACGGATTTAATCTGGGCAGCTTTGTAGTGGCAGTAATCGGCTCACTGGTTGTTCTGTTTATTTATCGGAAGTTA AGAAGCTAG
Upstream 100 bases:
>100_bases ACTGTCTGCTTAGGCGTAACATGTTTTGAATCAACCGATATGGTGGTTTAGAACATATGGGGTAAGCGGAACAGTAATCA TTAATTTTATGGAGGCGCTC
Downstream 100 bases:
>100_bases TACCGGAAACTAAAAAGCCAGTACTGGAAATTAAGCAGCTCGCTCCTGCCGCTGTCAGTGGTAATGATTTAACATCACAG ACAGTCATTAATTAAACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MGILSWIIFGLIAGILAKWIMPGEDGGGFIMTIILGIIGALVGGYISTFFGMGRVDGFNLGSFVVAVIGSLVVLFIYRKL RS
Sequences:
>Translated_82_residues MGILSWIIFGLIAGILAKWIMPGEDGGGFIMTIILGIIGALVGGYISTFFGMGRVDGFNLGSFVVAVIGSLVVLFIYRKL RS >Mature_81_residues GILSWIIFGLIAGILAKWIMPGEDGGGFIMTIILGIIGALVGGYISTFFGMGRVDGFNLGSFVVAVIGSLVVLFIYRKLR S
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0410 family [H]
Homologues:
Organism=Escherichia coli, GI1788096, Length=82, Percent_Identity=82.9268292682927, Blast_Score=115, Evalue=4e-28, Organism=Escherichia coli, GI1787445, Length=83, Percent_Identity=63.855421686747, Blast_Score=98, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007341 [H]
Pfam domain/function: PF04226 Transgly_assoc [H]
EC number: NA
Molecular weight: Translated: 8699; Mature: 8568
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILSWIIFGLIAGILAKWIMPGEDGGGFIMTIILGIIGALVGGYISTFFGMGRVDGFNL CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH GSFVVAVIGSLVVLFIYRKLRS HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GILSWIIFGLIAGILAKWIMPGEDGGGFIMTIILGIIGALVGGYISTFFGMGRVDGFNL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH GSFVVAVIGSLVVLFIYRKLRS HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]