| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yagK [H]
Identifier: 153949118
GI number: 153949118
Start: 924077
End: 924703
Strand: Direct
Name: yagK [H]
Synonym: YpsIP31758_0768
Alternate gene names: 153949118
Gene position: 924077-924703 (Clockwise)
Preceding gene: 153947054
Following gene: 153947997
Centisome position: 19.56
GC content: 50.4
Gene sequence:
>627_bases ATGGTAGTAGACCAACGCCATGAACCTTTCAACGAGAAATATCTACAGCGTATCGAAGGGGTACTCTGTAACGCACTGCA GGACCATCCACAAACCACGGTTATCAGGGTGGATTTACACTTACCGGAAGCCGGAGATGTGGGTGACAGTATTGTCAGTG ATGCTGACTTAAGCCCGGGGCTAATGTCCCGCTTTATCGACTCACTGAAAGCTCAGATAGTCGCTTACCGACAAAGAAAA GCCAGGGAAGGTAAACGCTGCCATCGCTCTTCAGTTCGCTACGTCTGGGTGCTGGAGCAACCAGAACTGGGTGGTAAGAA GCATTATCACATGGCCCTCTTCGTCAACACAGACACGTTCAATGCTCTGGGAAGCTACGGCGAGCAGGGGAAAGGTCTGG CCTCTCTTGTTCAGAACGCCTGGCTAAGTGCAATGAATAAGCGTGACTGGCCTGAATATCTGACGTTGGTGCACTTTGTT GATAATCCTCTGGCTTTCCTGGAGCTCAATAAGCCGGACTTCATGGGTAAACTGGATGCACTGACTTTCCGTCTGAGTTA CATGGCAAAGCATCGTACCAAACGCTACAGCAGCGCAGAACGCTCATTTGGTTGCAGCCAGTACTGA
Upstream 100 bases:
>100_bases ACTATGCCTGTCTGTGTTTCAGGAAGGCAGTACTATGCCTGCTGTTTCCCTACAGGTGGAGGAAACTATTATGTTTTTGT TCGATGACATCATCCACCCA
Downstream 100 bases:
>100_bases GACGTTATCATAACGACCGGCTCTGTAAGATGGGCCGGTACTCAGCTCGGCATCTCGATTTAATTACGTAGCATCCCCTT CTTTTTACTGGCGCTATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MVVDQRHEPFNEKYLQRIEGVLCNALQDHPQTTVIRVDLHLPEAGDVGDSIVSDADLSPGLMSRFIDSLKAQIVAYRQRK AREGKRCHRSSVRYVWVLEQPELGGKKHYHMALFVNTDTFNALGSYGEQGKGLASLVQNAWLSAMNKRDWPEYLTLVHFV DNPLAFLELNKPDFMGKLDALTFRLSYMAKHRTKRYSSAERSFGCSQY
Sequences:
>Translated_208_residues MVVDQRHEPFNEKYLQRIEGVLCNALQDHPQTTVIRVDLHLPEAGDVGDSIVSDADLSPGLMSRFIDSLKAQIVAYRQRK AREGKRCHRSSVRYVWVLEQPELGGKKHYHMALFVNTDTFNALGSYGEQGKGLASLVQNAWLSAMNKRDWPEYLTLVHFV DNPLAFLELNKPDFMGKLDALTFRLSYMAKHRTKRYSSAERSFGCSQY >Mature_208_residues MVVDQRHEPFNEKYLQRIEGVLCNALQDHPQTTVIRVDLHLPEAGDVGDSIVSDADLSPGLMSRFIDSLKAQIVAYRQRK AREGKRCHRSSVRYVWVLEQPELGGKKHYHMALFVNTDTFNALGSYGEQGKGLASLVQNAWLSAMNKRDWPEYLTLVHFV DNPLAFLELNKPDFMGKLDALTFRLSYMAKHRTKRYSSAERSFGCSQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfjJ [H]
Homologues:
Organism=Escherichia coli, GI1786473, Length=196, Percent_Identity=38.7755102040816, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1788979, Length=196, Percent_Identity=30.6122448979592, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021723 [H]
Pfam domain/function: PF11726 DUF3296 [H]
EC number: NA
Molecular weight: Translated: 23809; Mature: 23809
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVDQRHEPFNEKYLQRIEGVLCNALQDHPQTTVIRVDLHLPEAGDVGDSIVSDADLSPG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCHH LMSRFIDSLKAQIVAYRQRKAREGKRCHRSSVRYVWVLEQPELGGKKHYHMALFVNTDTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEEECCCH NALGSYGEQGKGLASLVQNAWLSAMNKRDWPEYLTLVHFVDNPLAFLELNKPDFMGKLDA HHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH LTFRLSYMAKHRTKRYSSAERSFGCSQY HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVVDQRHEPFNEKYLQRIEGVLCNALQDHPQTTVIRVDLHLPEAGDVGDSIVSDADLSPG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCHH LMSRFIDSLKAQIVAYRQRKAREGKRCHRSSVRYVWVLEQPELGGKKHYHMALFVNTDTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEEECCCH NALGSYGEQGKGLASLVQNAWLSAMNKRDWPEYLTLVHFVDNPLAFLELNKPDFMGKLDA HHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH LTFRLSYMAKHRTKRYSSAERSFGCSQY HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]