| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949095
Identifier: 153949095
GI number: 153949095
Start: 4193378
End: 4194616
Strand: Reverse
Name: 153949095
Synonym: YpsIP31758_3716
Alternate gene names: NA
Gene position: 4194616-4193378 (Counterclockwise)
Preceding gene: 153949810
Following gene: 153949528
Centisome position: 88.81
GC content: 34.54
Gene sequence:
>1239_bases ATGACTATTTATCAAGGTGGAATTCCTTTAGATGTGAGTGATTATCAATCACATATTTACTCATTATGCCAGTTAGATAA TATTGGAGTATTACTGGGCGCTGGTTCTTCTGTGGGTTGCGGCGGATGGACAATGGAAGATATCTGGAAGGAGTTTAAAA AAAACCACCCAGACTATGTCCACAAATTGATTAATCATTATTTTCTAGTTGATATTAATGAATCAAATAACGATACAGTG AATGTCGAGTTGTTAATTGATGAAGCATCAAAATTTATTTCTGTTGCAAGAATAAGACGGGAAAACGAAGTCGTTAATGA TTTTAATTCCATTTTAAAAAATTTATATAAAACAGTTACACAAGCGGCATTATTGACTGGAGAAAATTTCCCTGAAAAAA ATCAAGGTAGAGATAATAAATTTGATGCACATAAGGAGTTGATAGCCAAATTAATGTCAAATAGACAACCGGGGCAATCA GCTCCGGCGTTGTTTACTACTAACTACGATTTAGCTCTAGAGTGGGCAGCTGAAGATATCGGAGTACAACTATTTAATGG TTTTTCTGGTTTACATACTCGCCAGTTCTATCCGCAAAATTTTGATCTGTCATTTAGGAATGTAAATGCTAAGGGGGAAG CACGATTTGGTCATTACCATGCTTACCTTTTTAAATTACATGGCTCTTTAACTTGGCATCAAGATGATAGCTTAGCTATA ACAGAAGTTAGTGCTTCACAGGCATATAATAATTATCTTAAGAAAGTAATTGATGGTGATGACTTACAACTTGGTCAGTA TTTGATCTACCCTGGTGCTAATAAATATAGTCATACTATAGGTTTTGTCTATGGTGAGATGTTCCGTCGATTTAGTGAGT TTTTATCGAAGCCACAAACTGCACTTTTTATAAATGGATTTGGATTTGGTGACTATCATATAAATCGTATTATTCTCGGT GCATTATTAAATCCGTCGCTACATATTGTTATTTATTATCCGAATTTGGATGCTGCAGAAGCTAATTTTGCTTTAGATAA TGCATCAGAAGGAGAGAAAATAATAATAAGAATTAAAAGCATGGCTTTAAAGCAGATTACTGTAGTTGGCGGTGGAGAGC GTGCTTATTTTAATAAGTTCGTAAATGACTTACCTTATCCAGTCCTTTTTCCAAGGAAGGATGGGATTGATGATTTGGCA CAGGCTATTATTGATTTGACCAAAGGACAGAATAAATGA
Upstream 100 bases:
>100_bases GGTTTTCATCATGGTTTTGTGAGGTATAACTTTGATCTCTTAATAAAACATTAGTATTGTTTATGATATTGATTTATAAA AAATCACTTAGTAGGAAAAA
Downstream 100 bases:
>100_bases GTTATTTCAATTTAAAAGAGCTGCCTGCTGTTGGGTATGTTGTAGGTTTAGAAGGGGATAGAATAAGAGTTAACCTTCAC GAAGGATTGCAAGGCCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTIYQGGIPLDVSDYQSHIYSLCQLDNIGVLLGAGSSVGCGGWTMEDIWKEFKKNHPDYVHKLINHYFLVDINESNNDTV NVELLIDEASKFISVARIRRENEVVNDFNSILKNLYKTVTQAALLTGENFPEKNQGRDNKFDAHKELIAKLMSNRQPGQS APALFTTNYDLALEWAAEDIGVQLFNGFSGLHTRQFYPQNFDLSFRNVNAKGEARFGHYHAYLFKLHGSLTWHQDDSLAI TEVSASQAYNNYLKKVIDGDDLQLGQYLIYPGANKYSHTIGFVYGEMFRRFSEFLSKPQTALFINGFGFGDYHINRIILG ALLNPSLHIVIYYPNLDAAEANFALDNASEGEKIIIRIKSMALKQITVVGGGERAYFNKFVNDLPYPVLFPRKDGIDDLA QAIIDLTKGQNK
Sequences:
>Translated_412_residues MTIYQGGIPLDVSDYQSHIYSLCQLDNIGVLLGAGSSVGCGGWTMEDIWKEFKKNHPDYVHKLINHYFLVDINESNNDTV NVELLIDEASKFISVARIRRENEVVNDFNSILKNLYKTVTQAALLTGENFPEKNQGRDNKFDAHKELIAKLMSNRQPGQS APALFTTNYDLALEWAAEDIGVQLFNGFSGLHTRQFYPQNFDLSFRNVNAKGEARFGHYHAYLFKLHGSLTWHQDDSLAI TEVSASQAYNNYLKKVIDGDDLQLGQYLIYPGANKYSHTIGFVYGEMFRRFSEFLSKPQTALFINGFGFGDYHINRIILG ALLNPSLHIVIYYPNLDAAEANFALDNASEGEKIIIRIKSMALKQITVVGGGERAYFNKFVNDLPYPVLFPRKDGIDDLA QAIIDLTKGQNK >Mature_411_residues TIYQGGIPLDVSDYQSHIYSLCQLDNIGVLLGAGSSVGCGGWTMEDIWKEFKKNHPDYVHKLINHYFLVDINESNNDTVN VELLIDEASKFISVARIRRENEVVNDFNSILKNLYKTVTQAALLTGENFPEKNQGRDNKFDAHKELIAKLMSNRQPGQSA PALFTTNYDLALEWAAEDIGVQLFNGFSGLHTRQFYPQNFDLSFRNVNAKGEARFGHYHAYLFKLHGSLTWHQDDSLAIT EVSASQAYNNYLKKVIDGDDLQLGQYLIYPGANKYSHTIGFVYGEMFRRFSEFLSKPQTALFINGFGFGDYHINRIILGA LLNPSLHIVIYYPNLDAAEANFALDNASEGEKIIIRIKSMALKQITVVGGGERAYFNKFVNDLPYPVLFPRKDGIDDLAQ AIIDLTKGQNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46507; Mature: 46376
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYQGGIPLDVSDYQSHIYSLCQLDNIGVLLGAGSSVGCGGWTMEDIWKEFKKNHPDYV CEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHH HKLINHYFLVDINESNNDTVNVELLIDEASKFISVARIRRENEVVNDFNSILKNLYKTVT HHHHCCEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAALLTGENFPEKNQGRDNKFDAHKELIAKLMSNRQPGQSAPALFTTNYDLALEWAAEDI HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECHHHH GVQLFNGFSGLHTRQFYPQNFDLSFRNVNAKGEARFGHYHAYLFKLHGSLTWHQDDSLAI HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHEEEEEEEECEEEEECCCCEEE TEVSASQAYNNYLKKVIDGDDLQLGQYLIYPGANKYSHTIGFVYGEMFRRFSEFLSKPQT EECHHHHHHHHHHHHHHCCCCCEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCE ALFINGFGFGDYHINRIILGALLNPSLHIVIYYPNLDAAEANFALDNASEGEKIIIRIKS EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCEEEEEEEH MALKQITVVGGGERAYFNKFVNDLPYPVLFPRKDGIDDLAQAIIDLTKGQNK HHEEEEEEEECCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TIYQGGIPLDVSDYQSHIYSLCQLDNIGVLLGAGSSVGCGGWTMEDIWKEFKKNHPDYV EEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHH HKLINHYFLVDINESNNDTVNVELLIDEASKFISVARIRRENEVVNDFNSILKNLYKTVT HHHHCCEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAALLTGENFPEKNQGRDNKFDAHKELIAKLMSNRQPGQSAPALFTTNYDLALEWAAEDI HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECHHHH GVQLFNGFSGLHTRQFYPQNFDLSFRNVNAKGEARFGHYHAYLFKLHGSLTWHQDDSLAI HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHEEEEEEEECEEEEECCCCEEE TEVSASQAYNNYLKKVIDGDDLQLGQYLIYPGANKYSHTIGFVYGEMFRRFSEFLSKPQT EECHHHHHHHHHHHHHHCCCCCEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCE ALFINGFGFGDYHINRIILGALLNPSLHIVIYYPNLDAAEANFALDNASEGEKIIIRIKS EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCEEEEEEEH MALKQITVVGGGERAYFNKFVNDLPYPVLFPRKDGIDDLAQAIIDLTKGQNK HHEEEEEEEECCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA