| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is torZ [C]
Identifier: 153949081
GI number: 153949081
Start: 1163414
End: 1165675
Strand: Direct
Name: torZ [C]
Synonym: YpsIP31758_0974
Alternate gene names: 153949081
Gene position: 1163414-1165675 (Clockwise)
Preceding gene: 153949493
Following gene: 153948626
Centisome position: 24.63
GC content: 52.12
Gene sequence:
>2262_bases ATGTCCATCATCCGTTACCCCCAACTTGCCCATTGGGGCGCTTATACCGCAGTTGTTGAAGATGGCAAGCTGATCCGCTG CGAGCCATTTGCCGATGATCCCGATCCCTCGCCGCTACTGAACTCAATTGTTCCGATGGTTTACTCCGATAAACGTATCC GTAAACCCGCCATCCGCCGTTCTTGGTTAAAGCGGCGGGAGAAGAGTGACCGGACTCTACGCGGGCAGGAGGATTTTGTT GAAGTCGACTGGGATGTGGCGCTGGATTTAGTGGCCGAAGAGAATCGCCGGGTTAGGGACCAATACGGGCCTGCTGGGTT ATTTACCGGCTCTTATGGCTGGTCTTCTGCGGGGCGTTTACATCATGCCCGCTCATTAGTTCGGCGTTTCTATTTCAGTG GCGGTGGCGGTGTCGATCAATTAGGTAATTACAGTTGGGGGGCTGCACAATTTTTCCTGCCTTATGTCATTGGGACCTTT AGCCCATTGACCGGGCGGGTGACGTCATGGCCCAGTGTGGTGGAACACTGTGAATTGTTCATTGCTTTTGGTGGGCTGGC ACTGAAAAATGCGCAAGTCTCCTCCGGTGGGTCGGCTGAACATTCCCTTAAACTCTGGCTAGAGAAACTGGCACAAAAAG GGACGCCAGTCATTAATATCAGCCCGATGCGTGATGATTGCCCCGCATTTGTTAACGCGGAATGGATACCCATTCGTCCG AATACAGACGTCGCGCTGATGTTGGCGTTGGCTTATGAAATTCAGCGCCTTGATGGTCATGATGAGGCATTCCTTGCAAC CCATTGTGTGGGTTATGGTCAATTGGCTGATTATATTCGTGGGGCCAATGACGGGATAGCGAAAACTCCAGACTGGGCGA GCAGCATTACCGGTATTCCTGCGGCCAGAATCGCACAGTTAGCGCAACAACTTATCGGTGTGCGCAGTTTTATGACCTGT TCGTATTCGGTGCAACGTGCGCATCGTGGTGAGCAACCGTATTGGATGGTGATTGCATTATCAGCCATGTTGGGGCAAGT CGGGCTACCGGGTGGGGGTTTTTCATTCGGTCATGGTTCGATGAATGGCGTGGGTAACCCGCGCATTGATACACCGGGGC CAGCCATGCCAGTGGGTAAGAACCCCGCCGGATTGGCTATTCCTGTGGCACGGATTTGCGACATGTTGTTACAACCGGGG CAACCATATCAATTTCAGGGTGAAACACATACCTACCCGGATATTCATTTGGTGCATTGGGCGGGTGGGAACCCGTTCCA TCATCATCAGCAGTTGAATCGGTTGGTTGAGGGGTGGCAAAAACCGGATACCGTGATCGTACAGGACATTTGGTGGACGC CCGCAGCAAAAATGGCCGATATCGTCCTGCCAGTCACCAGTTCACTGGAGCGTAATGATATCGGTGGATCATCCAGGGAT CGCTATGCCTTGGCGATGCATCAGGCGATTGCACCACAGCATCAGGCGCGCCACGATTTTGATATTTTCGCCGACTTGGC TGACCGATTGGGCTACCGTGAAACCTTTACCGAGGGTCGTGATGAAATGGCGTGGATCAGGCATATTTATCAGGAGTGTG GTGCGGCACAGCGCTCTCATGATGTTGAATGGCCAGATTTTGAGACTTTTTGGCAACAAGGGTATGTCGGTTTACCTGCT CCCGCCAAAGCATTTGTGTTCTTTGATTCTTTCCGTGAAGACCCACAGGCTAATCCATTACAGACCCCGAGTGGCAAAAT TGAATTATTTAGTGAAAAAATTGCCAGCTACCAATACAACGATTTTGCACCTCATGCAGAGTGGAAACCTCCGGTCGAAT GGCTGGGCGCTCCGCTGGCTGAACAGTGGCCGCTACATTTAATCTCTATTCAACCGGGAGATCGCTTACACAGTCAGCTC GATCCCGCCCCATTGGCTCAGAGCAATAAAACCGCAGGTCGTGAAACGCTGTATATGCATCCGCTGGATGCGGCCAGCCG TGATATTACCGAAGGTAGTCAGGTCCAGGTTAGCAACTTACGCGGTCACTGTCTGGCGGGGGTCAGTATTACTGATGGGG TTACCCGTGGGGTGGTATTGATGGCAACCGGAGCCTGGTTTGATCCTGGTTTTGGGGGCACGCAGCATAAAATTGAACAA TCCGGTAACCCAAATGTATTGACGCTGGATATTGGGACATCTCGATTGACTCAAGGCCCAAATGCGATGAGCTGTTTGGT CGAGGTGGCGCTTTATGAGTAG
Upstream 100 bases:
>100_bases GTGTATCGCCCCAAATGACTATGTTTAGTCGAAATGGTGCTTTGAGTATGTGCGGTGGCGAATGTTACCTTGATGTTTTA TTTCATTGCCTGAGAGAGCC
Downstream 100 bases:
>100_bases ATTATCTTTCGTTTGCCGCCTTCCTGTAGCTCGAATTATTTAGGGTCTATTCGCCAAACAGCCACTTGGGAATGTATTTC TCTGGTGGCTGAAATGCGAT
Product: molybdopterin oxidoreductase
Products: Biotin [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MSIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRRSWLKRREKSDRTLRGQEDFV EVDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRLHHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTF SPLTGRVTSWPSVVEHCELFIAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRP NTDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIPAARIAQLAQQLIGVRSFMTC SYSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPG QPYQFQGETHTYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTSSLERNDIGGSSRD RYALAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSHDVEWPDFETFWQQGYVGLPA PAKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYNDFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQL DPAPLAQSNKTAGRETLYMHPLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQ SGNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE
Sequences:
>Translated_753_residues MSIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRRSWLKRREKSDRTLRGQEDFV EVDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRLHHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTF SPLTGRVTSWPSVVEHCELFIAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRP NTDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIPAARIAQLAQQLIGVRSFMTC SYSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPG QPYQFQGETHTYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTSSLERNDIGGSSRD RYALAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSHDVEWPDFETFWQQGYVGLPA PAKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYNDFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQL DPAPLAQSNKTAGRETLYMHPLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQ SGNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE >Mature_752_residues SIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRRSWLKRREKSDRTLRGQEDFVE VDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRLHHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTFS PLTGRVTSWPSVVEHCELFIAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRPN TDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIPAARIAQLAQQLIGVRSFMTCS YSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPGQ PYQFQGETHTYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTSSLERNDIGGSSRDR YALAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSHDVEWPDFETFWQQGYVGLPAP AKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYNDFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQLD PAPLAQSNKTAGRETLYMHPLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQS GNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=760, Percent_Identity=39.0789473684211, Blast_Score=548, Evalue=1e-157, Organism=Escherichia coli, GI145693196, Length=763, Percent_Identity=39.4495412844037, Blast_Score=523, Evalue=1e-149, Organism=Escherichia coli, GI1787231, Length=767, Percent_Identity=39.374185136897, Blast_Score=515, Evalue=1e-147, Organism=Escherichia coli, GI87081797, Length=713, Percent_Identity=30.7152875175316, Blast_Score=285, Evalue=7e-78, Organism=Escherichia coli, GI1787870, Length=751, Percent_Identity=28.7616511318242, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI171474008, Length=746, Percent_Identity=28.0160857908847, Blast_Score=245, Evalue=9e-66, Organism=Escherichia coli, GI3868721, Length=768, Percent_Identity=20.3125, Blast_Score=102, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.7.2.3 [C]
Molecular weight: Translated: 83278; Mature: 83147
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRR CCCCCCCCHHHCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHCCHHHHH SWLKRREKSDRTLRGQEDFVEVDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRL HHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHCCCCEEEECCCCCCCCCHH HHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTFSPLTGRVTSWPSVVEHCELF HHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH IAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRP HHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC NTDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIP CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCC AARIAQLAQQLIGVRSFMTCSYSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCC MNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPGQPYQFQGETHTYPDIHLVHW CCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEE AGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTSSLERNDIGGSSRD CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHEEECCCCCCCCCCCCCCCCC RYALAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSH HHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCHHHCC DVEWPDFETFWQQGYVGLPAPAKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYN CCCCCCHHHHHHCCCCCCCCCCHHEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCC DFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQLDPAPLAQSNKTAGRETLYMH CCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEC PLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQ CCCCCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHC SGNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE CCCCCEEEEECCHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure SIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRR CCCCCCCHHHCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHCCHHHHH SWLKRREKSDRTLRGQEDFVEVDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRL HHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHCCCCEEEECCCCCCCCCHH HHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTFSPLTGRVTSWPSVVEHCELF HHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH IAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRP HHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC NTDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIP CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCC AARIAQLAQQLIGVRSFMTCSYSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCC MNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPGQPYQFQGETHTYPDIHLVHW CCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEE AGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPAAKMADIVLPVTSSLERNDIGGSSRD CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHEEECCCCCCCCCCCCCCCCC RYALAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSH HHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCHHHCC DVEWPDFETFWQQGYVGLPAPAKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYN CCCCCCHHHHHHCCCCCCCCCCHHEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCC DFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQLDPAPLAQSNKTAGRETLYMH CCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEC PLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQ CCCCCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHC SGNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE CCCCCEEEEECCHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds) [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7733660 [H]