| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949078
Identifier: 153949078
GI number: 153949078
Start: 2774405
End: 2775481
Strand: Direct
Name: 153949078
Synonym: YpsIP31758_2457
Alternate gene names: NA
Gene position: 2774405-2775481 (Clockwise)
Preceding gene: 153947488
Following gene: 153949265
Centisome position: 58.74
GC content: 47.63
Gene sequence:
>1077_bases ATGAAAAAAATCGCTTACCCTATATTGGCTTTGAGCCTACTCACAGCACTGCCGGTATTTGCTGCTGACCCCGTCACATT AGCTCCGGTACCGGACGCTATCGCCAACCATCAAGGTCAGATTAAAATTGCGGTAATCCGTAATTTAGGCTCCGATGACA ACACGACACAATTCCTGTCCGGTGTATTAAAAGAAGGCAAAAAGCTGGGCTTCAAAGTGGATACGTTTCTGAGTAACGGC GACGACGCTCGCTTTCAGGACTTTGTCAATCAGGCTATTAGCCAGAAATACGACGGTATCATTCTTTCTCAGGGCCGCGC CCCCTACTCAACAGAGTTGGTAAAGCGCATTACCGATAATGGAATTGCCGTATCGGTATTTGACACTGCTATTCAGGGCG AGATTCCAGGGCTGACAGTCACTCAACAGGATGACGCCTCATTAACCAATGAATCCTTCGGTCAGTTAATCAAAGACTTC GATGGTAACGCCAATATTATCAAGCTTTGGGTCGCAGGTTTCCCACCAATGGAAAGGCGCCAAGCCGCTTATCAAGCATT GCTAAAGCAGAATCCTGGGATTATTGAACTGGAATCTATCGGTGCAGTTTCCTCTGATGTTCAGGGTGATACCGCCAATA AAGTCGGCGCGGTATTGGCGAAATACCCAAAAGGTAAAATAGATGCAATCTGGGGAACTTGGGATGCCTTCACACAGGGC GCTTATAAAGCCTTACAAGAAAATGGCCGCACTGAGATAAAACTGTATAGCATTGATATTTCGAATCAAGACTTACAACT TATGCGCGAAGCTAATAGCCCATGGAAAGTCAGTGTTGCGGTAGATCCTAAGCTAATTGGCGCCATTAACCTGCGCCTGA TTGCCAAGAAAATTGCGGGGGAAACCACACCTGCCAGCTATGAATTCCGCGCGGCTTCCATTCCTCAGGCATTGCTAGCC AGCCAACCTGGCCCGGTTAATGTGGCGGGTTTAAGTAAGATTATCCCCGGTTGGGGTCAGTCTGATGATTTCAACTCTCC TTGGTTTGCGACCCTTGCAGCCCAAAATGGTCAATAG
Upstream 100 bases:
>100_bases ACAAACACATGATGCCTGTAACCATATGATTCCTATACTAACGGTCATTATAAAACAACAACACATTGCATAACTTACCG ACACCATGATGGAGTTCCTG
Downstream 100 bases:
>100_bases ATTTGGAGTAAGTATTGATGGCAACACAAGGTTCCTTGCCGATACCTGAATACAGCCGCAATATGCGGCTGATTGGTCAC AGTGACCAAGGTGGCAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Ribose ABC Transporter; Transport System Protein; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKKIAYPILALSLLTALPVFAADPVTLAPVPDAIANHQGQIKIAVIRNLGSDDNTTQFLSGVLKEGKKLGFKVDTFLSNG DDARFQDFVNQAISQKYDGIILSQGRAPYSTELVKRITDNGIAVSVFDTAIQGEIPGLTVTQQDDASLTNESFGQLIKDF DGNANIIKLWVAGFPPMERRQAAYQALLKQNPGIIELESIGAVSSDVQGDTANKVGAVLAKYPKGKIDAIWGTWDAFTQG AYKALQENGRTEIKLYSIDISNQDLQLMREANSPWKVSVAVDPKLIGAINLRLIAKKIAGETTPASYEFRAASIPQALLA SQPGPVNVAGLSKIIPGWGQSDDFNSPWFATLAAQNGQ
Sequences:
>Translated_358_residues MKKIAYPILALSLLTALPVFAADPVTLAPVPDAIANHQGQIKIAVIRNLGSDDNTTQFLSGVLKEGKKLGFKVDTFLSNG DDARFQDFVNQAISQKYDGIILSQGRAPYSTELVKRITDNGIAVSVFDTAIQGEIPGLTVTQQDDASLTNESFGQLIKDF DGNANIIKLWVAGFPPMERRQAAYQALLKQNPGIIELESIGAVSSDVQGDTANKVGAVLAKYPKGKIDAIWGTWDAFTQG AYKALQENGRTEIKLYSIDISNQDLQLMREANSPWKVSVAVDPKLIGAINLRLIAKKIAGETTPASYEFRAASIPQALLA SQPGPVNVAGLSKIIPGWGQSDDFNSPWFATLAAQNGQ >Mature_358_residues MKKIAYPILALSLLTALPVFAADPVTLAPVPDAIANHQGQIKIAVIRNLGSDDNTTQFLSGVLKEGKKLGFKVDTFLSNG DDARFQDFVNQAISQKYDGIILSQGRAPYSTELVKRITDNGIAVSVFDTAIQGEIPGLTVTQQDDASLTNESFGQLIKDF DGNANIIKLWVAGFPPMERRQAAYQALLKQNPGIIELESIGAVSSDVQGDTANKVGAVLAKYPKGKIDAIWGTWDAFTQG AYKALQENGRTEIKLYSIDISNQDLQLMREANSPWKVSVAVDPKLIGAINLRLIAKKIAGETTPASYEFRAASIPQALLA SQPGPVNVAGLSKIIPGWGQSDDFNSPWFATLAAQNGQ
Specific function: Unknown
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38501; Mature: 38501
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAYPILALSLLTALPVFAADPVTLAPVPDAIANHQGQIKIAVIRNLGSDDNTTQFLS CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCCCEEEEEEECCCCCCCHHHHHH GVLKEGKKLGFKVDTFLSNGDDARFQDFVNQAISQKYDGIILSQGRAPYSTELVKRITDN HHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCC GIAVSVFDTAIQGEIPGLTVTQQDDASLTNESFGQLIKDFDGNANIIKLWVAGFPPMERR CEEEEEECHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH QAAYQALLKQNPGIIELESIGAVSSDVQGDTANKVGAVLAKYPKGKIDAIWGTWDAFTQG HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHH AYKALQENGRTEIKLYSIDISNQDLQLMREANSPWKVSVAVDPKLIGAINLRLIAKKIAG HHHHHHHCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCC ETTPASYEFRAASIPQALLASQPGPVNVAGLSKIIPGWGQSDDFNSPWFATLAAQNGQ CCCCCCEEEEHHCCCHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MKKIAYPILALSLLTALPVFAADPVTLAPVPDAIANHQGQIKIAVIRNLGSDDNTTQFLS CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCCCEEEEEEECCCCCCCHHHHHH GVLKEGKKLGFKVDTFLSNGDDARFQDFVNQAISQKYDGIILSQGRAPYSTELVKRITDN HHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCC GIAVSVFDTAIQGEIPGLTVTQQDDASLTNESFGQLIKDFDGNANIIKLWVAGFPPMERR CEEEEEECHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH QAAYQALLKQNPGIIELESIGAVSSDVQGDTANKVGAVLAKYPKGKIDAIWGTWDAFTQG HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHH AYKALQENGRTEIKLYSIDISNQDLQLMREANSPWKVSVAVDPKLIGAINLRLIAKKIAG HHHHHHHCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCC ETTPASYEFRAASIPQALLASQPGPVNVAGLSKIIPGWGQSDDFNSPWFATLAAQNGQ CCCCCCEEEEHHCCCHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA