Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153949071

Identifier: 153949071

GI number: 153949071

Start: 3871153

End: 3872655

Strand: Reverse

Name: 153949071

Synonym: YpsIP31758_3435

Alternate gene names: NA

Gene position: 3872655-3871153 (Counterclockwise)

Preceding gene: 153948157

Following gene: 153948599

Centisome position: 81.99

GC content: 48.24

Gene sequence:

>1503_bases
ATGCAGAAAGCCCAACTCAATGACACGCCAGACATCAACGTCGATCTGGCTGAAAACGAGTTAGATGACATTTTAAAACG
TTCTTTTCGCCCTCGAACTGACGAAGCTTCCGCCACAGTGCGCCGTGCCATAGGCACGCTTGCTGCGTATGCCAATAAAG
GCCAAGTGAAAGTCAATCGTGATGTCGTACTGACCATTGAGTCTTTAGTCGCTGAAATTGACGAAAAACTTTCCGATCAA
ATGAACCTTATTCTGCACCATAAAGAGTTCCAAAAGCTGGAATCAGCTTGGCGCGGGCTTAGCTATCTTGTTGATAATAC
AGATGCTAATGAAACTTTAAAAATACGGGTACTGAACATTAGCCAAGATGAACTGGGGAAAACGCTTCGCCGTTATCGTG
GCTCTGCATGGGATCAAAGTCCGATATTTAAACAGGTCTATGAACATGAATATGGGCAGTTTGGTGGGGAACCTTTTGGT
TGCATGATCGGTGATTATGAATTCGATCACAGTCCACAGAGTGTGGCTCTGCTGACCGAGTTAGCCAAGGTGGCCGCCGC
CGCTCACTGTCCTTTCATTACCTCTTCTTCCCCAAGCATCATGCAGATGAATAACTGGAGGGAGCTGGGTAACCCAAGGG
ATATCGGCAAAATTTTTACCACACCTGAATATGCGCCATGGAGACGTTTACGTGAGAGTAATGACTCCCGCTATCTGGTA
CTGACTCTGCCACGTTTTCTTTCGCGTCTGCCGTATGGTGCCAAAAATCATCCTATTGATGATTTTGCTTTTGAAGAAGT
GGTTAGCCCTCATGCCAGTGAGGATTTCACTTGGGCGAATGCGGCCTATGCCATGGGCGTCAATATTAACCGGGCCTTCA
ATGAATATGGTTGGTGTTCAAGGATCCGCGGTATTGAGTCGGGGGGGTCCGTAGAAGAACTTCCGGCCTATGCTTTTCCT
TCTGACGAAGGCGGATATGAACTCACTTGTCCGACAGAATTGGCAATTTCGGACCGTCGTGAGAACGAGCTATCCAATGC
TGGTTTTTTACCGCTGGTCTACCGTAAGAACTCAGACTTTGCCGCCTTTATCGGGTCGTGCACCCTGCATGCACCGGCAA
ACTATGATGACCCCGATGCGACGGCGAACGCCAGATTATCGGCCCGTTTACCTTACATTTTTGCCACCTGTCGTTTCGCC
CATTACCTCAAATGTATTGTGCGCGACAAAATTGGTTCGTTCCGCTCGCGGGATGACATGCAACTTTGGCTTAACGACTG
GGTGATGAACTACGTCGATGGTGACCCCTCCATTTCAACAGAAGCCACTAAAGCTAAACGCCCGCTGGCCGCTGCGGAAG
TTCAAGTTGAAGACGTAGAGGATGATCCTGGTTTTTACCGCGCTCACTTCTATTTACGCCCTCACTACCAACTTGAAGGT
ATGACGGTTTCTCTGCGGCTGGTTTCTAAACTTCCATCCAACAAGGAAAGCGAAAAGAAATAA

Upstream 100 bases:

>100_bases
TACAAAATCTTGCGACCGATGCACAGGGAACTATTTCGAAGCTCAGCCAGGATGATGATGTTTTAGTGGAAGATGACGAT
GGAGAAAAATAGTGGAGAAC

Downstream 100 bases:

>100_bases
GCGCTGTGAATATCACTCGCTTATTAGAGGGGGAATATAAACATAAATATCAAGGAGGTAAGGCCGAAATTAAATAGGAA
AGTACATTTTTAATGAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MQKAQLNDTPDINVDLAENELDDILKRSFRPRTDEASATVRRAIGTLAAYANKGQVKVNRDVVLTIESLVAEIDEKLSDQ
MNLILHHKEFQKLESAWRGLSYLVDNTDANETLKIRVLNISQDELGKTLRRYRGSAWDQSPIFKQVYEHEYGQFGGEPFG
CMIGDYEFDHSPQSVALLTELAKVAAAAHCPFITSSSPSIMQMNNWRELGNPRDIGKIFTTPEYAPWRRLRESNDSRYLV
LTLPRFLSRLPYGAKNHPIDDFAFEEVVSPHASEDFTWANAAYAMGVNINRAFNEYGWCSRIRGIESGGSVEELPAYAFP
SDEGGYELTCPTELAISDRRENELSNAGFLPLVYRKNSDFAAFIGSCTLHAPANYDDPDATANARLSARLPYIFATCRFA
HYLKCIVRDKIGSFRSRDDMQLWLNDWVMNYVDGDPSISTEATKAKRPLAAAEVQVEDVEDDPGFYRAHFYLRPHYQLEG
MTVSLRLVSKLPSNKESEKK

Sequences:

>Translated_500_residues
MQKAQLNDTPDINVDLAENELDDILKRSFRPRTDEASATVRRAIGTLAAYANKGQVKVNRDVVLTIESLVAEIDEKLSDQ
MNLILHHKEFQKLESAWRGLSYLVDNTDANETLKIRVLNISQDELGKTLRRYRGSAWDQSPIFKQVYEHEYGQFGGEPFG
CMIGDYEFDHSPQSVALLTELAKVAAAAHCPFITSSSPSIMQMNNWRELGNPRDIGKIFTTPEYAPWRRLRESNDSRYLV
LTLPRFLSRLPYGAKNHPIDDFAFEEVVSPHASEDFTWANAAYAMGVNINRAFNEYGWCSRIRGIESGGSVEELPAYAFP
SDEGGYELTCPTELAISDRRENELSNAGFLPLVYRKNSDFAAFIGSCTLHAPANYDDPDATANARLSARLPYIFATCRFA
HYLKCIVRDKIGSFRSRDDMQLWLNDWVMNYVDGDPSISTEATKAKRPLAAAEVQVEDVEDDPGFYRAHFYLRPHYQLEG
MTVSLRLVSKLPSNKESEKK
>Mature_500_residues
MQKAQLNDTPDINVDLAENELDDILKRSFRPRTDEASATVRRAIGTLAAYANKGQVKVNRDVVLTIESLVAEIDEKLSDQ
MNLILHHKEFQKLESAWRGLSYLVDNTDANETLKIRVLNISQDELGKTLRRYRGSAWDQSPIFKQVYEHEYGQFGGEPFG
CMIGDYEFDHSPQSVALLTELAKVAAAAHCPFITSSSPSIMQMNNWRELGNPRDIGKIFTTPEYAPWRRLRESNDSRYLV
LTLPRFLSRLPYGAKNHPIDDFAFEEVVSPHASEDFTWANAAYAMGVNINRAFNEYGWCSRIRGIESGGSVEELPAYAFP
SDEGGYELTCPTELAISDRRENELSNAGFLPLVYRKNSDFAAFIGSCTLHAPANYDDPDATANARLSARLPYIFATCRFA
HYLKCIVRDKIGSFRSRDDMQLWLNDWVMNYVDGDPSISTEATKAKRPLAAAEVQVEDVEDDPGFYRAHFYLRPHYQLEG
MTVSLRLVSKLPSNKESEKK

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56617; Mature: 56617

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKAQLNDTPDINVDLAENELDDILKRSFRPRTDEASATVRRAIGTLAAYANKGQVKVNR
CCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECC
DVVLTIESLVAEIDEKLSDQMNLILHHKEFQKLESAWRGLSYLVDNTDANETLKIRVLNI
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEC
SQDELGKTLRRYRGSAWDQSPIFKQVYEHEYGQFGGEPFGCMIGDYEFDHSPQSVALLTE
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHH
LAKVAAAAHCPFITSSSPSIMQMNNWRELGNPRDIGKIFTTPEYAPWRRLRESNDSRYLV
HHHHHHHHCCCEEECCCCCEEEECCHHHCCCCHHCCHHCCCCCCHHHHHHHHCCCCCEEE
LTLPRFLSRLPYGAKNHPIDDFAFEEVVSPHASEDFTWANAAYAMGVNINRAFNEYGWCS
EEHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCEEEECCCHHHHHHHCCHHH
RIRGIESGGSVEELPAYAFPSDEGGYELTCPTELAISDRRENELSNAGFLPLVYRKNSDF
HHCCCCCCCCHHHCCCEECCCCCCCEEEECCCHHHHCCCHHHHHCCCCCEEEEEECCCCC
AAFIGSCTLHAPANYDDPDATANARLSARLPYIFATCRFAHYLKCIVRDKIGSFRSRDDM
EEEECCEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QLWLNDWVMNYVDGDPSISTEATKAKRPLAAAEVQVEDVEDDPGFYRAHFYLRPHYQLEG
HHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHEEEEECCCCCCCEEEEEEEEECCEEECC
MTVSLRLVSKLPSNKESEKK
CEEEEEEHHHCCCCCCCCCC
>Mature Secondary Structure
MQKAQLNDTPDINVDLAENELDDILKRSFRPRTDEASATVRRAIGTLAAYANKGQVKVNR
CCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECC
DVVLTIESLVAEIDEKLSDQMNLILHHKEFQKLESAWRGLSYLVDNTDANETLKIRVLNI
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEC
SQDELGKTLRRYRGSAWDQSPIFKQVYEHEYGQFGGEPFGCMIGDYEFDHSPQSVALLTE
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHH
LAKVAAAAHCPFITSSSPSIMQMNNWRELGNPRDIGKIFTTPEYAPWRRLRESNDSRYLV
HHHHHHHHCCCEEECCCCCEEEECCHHHCCCCHHCCHHCCCCCCHHHHHHHHCCCCCEEE
LTLPRFLSRLPYGAKNHPIDDFAFEEVVSPHASEDFTWANAAYAMGVNINRAFNEYGWCS
EEHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCEEEECCCHHHHHHHCCHHH
RIRGIESGGSVEELPAYAFPSDEGGYELTCPTELAISDRRENELSNAGFLPLVYRKNSDF
HHCCCCCCCCHHHCCCEECCCCCCCEEEECCCHHHHCCCHHHHHCCCCCEEEEEECCCCC
AAFIGSCTLHAPANYDDPDATANARLSARLPYIFATCRFAHYLKCIVRDKIGSFRSRDDM
EEEECCEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QLWLNDWVMNYVDGDPSISTEATKAKRPLAAAEVQVEDVEDDPGFYRAHFYLRPHYQLEG
HHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHEEEEECCCCCCCEEEEEEEEECCEEECC
MTVSLRLVSKLPSNKESEKK
CEEEEEEHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA