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The map label for this gene is copD [H]

Identifier: 153949049

GI number: 153949049

Start: 2639888

End: 2640772

Strand: Reverse

Name: copD [H]

Synonym: YpsIP31758_2338

Alternate gene names: 153949049

Gene position: 2640772-2639888 (Counterclockwise)

Preceding gene: 153949526

Following gene: 153948664

Centisome position: 55.91

GC content: 49.27

Gene sequence:

>885_bases
ATGTCTTTGGCGACTCTATTCATTCTGTGTCGCTTTCTGCACTTTATGGCAGTGATGCTGATGTTTGGCATCACTGTATT
CACCGCCTTTTTGGCACCAGATCGTTTCTCTTTGATACTAAAAAAACGCCTGTCACCGTTACTTGTCTCTAGTACGCTGC
TAGGGCTGATTTCTGCCGTGGGAATCTTGGCTATTCAGGCTGGAATGATGGGGGATGGCTGGGCAGACACCTACCGACTG
ACTGTCTGGTGGGCCGTCTTAGGGACGCGATTTGGTCAGGTATGGCAATGGCACATTGGCTTGTCCATCTTGAGTATGTG
GATCGTGTTGTTGGGTAGCGCGCGAAGGTATTACTGGCTGATGGTCGGCTGCTCTACATTGTTGCTCGCGAGCCTGGCTT
TTGCGGGGCATGCAGCGATGTATGATGGGGTACTTGGATGGGTTCACCAAACTAACCAAGTCATCCACCTGCTCAGTGCG
GGGTACTGGCTGGGATGTTTACTGCCGTTGCTTATTTGCCTTGCATACACTCGTGATAAGGGTGCCAAACGTGAAGCGAT
CACGACATTAATTCGATTTTCGAGCTGGGGGCACTTGGCCGTTGCCCTCGTGTTGGTCACTGGGGTAATAAATAGCCTTA
TTATGCTGCAAGATGCCACGCTGACGCTGACATCAAATTATCAGATGCTCTTACTGGGCAAAGTCATATTGGTGGTATTT
ATGCTTGCTGTTGCGCTGATTAACCGTTACCGCATTGTTCCGATGCTCAAGCAACTGCCCACGAAAGCACATCATTGGTT
AGTTATTAATAGCTGTTTTGAAATCGTGCTTGGCGTGGCAGTGCTATTGCTGGTCAGTATTTTTGCCACAATGGCGCCAG
TATAG

Upstream 100 bases:

>100_bases
GCCATGCTTTAGCTGCTGGAAAATATCATGTCTCATGGCACGTTGTCTCGGTTGATGGCCATAAGACGAAAGGCACTTAC
AGCTTCACTGTGAAATAGAT

Downstream 100 bases:

>100_bases
TGGGCAAGAATAAATGCCAGTTATTGCCGGTGAGCTTGCATCAACTCCGCGGTATGCGAGAAAATCAAAACAATTAGCTA
ATTGAGGGTAATTAAGATGA

Product: copper resistance protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAVGILAIQAGMMGDGWADTYRL
TVWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWLMVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSA
GYWLGCLLPLLICLAYTRDKGAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVF
MLAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV

Sequences:

>Translated_294_residues
MSLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAVGILAIQAGMMGDGWADTYRL
TVWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWLMVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSA
GYWLGCLLPLLICLAYTRDKGAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVF
MLAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV
>Mature_293_residues
SLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAVGILAIQAGMMGDGWADTYRLT
VWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWLMVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSAG
YWLGCLLPLLICLAYTRDKGAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVFM
LAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV

Specific function: Unknown

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopD family [H]

Homologues:

Organism=Escherichia coli, GI1788145, Length=291, Percent_Identity=40.2061855670103, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008457 [H]

Pfam domain/function: PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 32599; Mature: 32468

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GILAIQAGMMGDGWADTYRLTVWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSAGYWLGCLLPLLICLAYTRDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVF
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
MLAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLATLFILCRFLHFMAVMLMFGITVFTAFLAPDRFSLILKKRLSPLLVSSTLLGLISAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GILAIQAGMMGDGWADTYRLTVWWAVLGTRFGQVWQWHIGLSILSMWIVLLGSARRYYWL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MVGCSTLLLASLAFAGHAAMYDGVLGWVHQTNQVIHLLSAGYWLGCLLPLLICLAYTRDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAKREAITTLIRFSSWGHLAVALVLVTGVINSLIMLQDATLTLTSNYQMLLLGKVILVVF
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
MLAVALINRYRIVPMLKQLPTKAHHWLVINSCFEIVLGVAVLLLVSIFATMAPV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]