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The map label for this gene is flgC [H]

Identifier: 153949008

GI number: 153949008

Start: 748931

End: 749356

Strand: Direct

Name: flgC [H]

Synonym: YpsIP31758_0640

Alternate gene names: 153949008

Gene position: 748931-749356 (Clockwise)

Preceding gene: 153949189

Following gene: 153948005

Centisome position: 15.86

GC content: 51.64

Gene sequence:

>426_bases
ATGTCTTTTAACCAAATCTATCGGGTGGCTGGCTCGGCAATGACCGCTCAGACCATCCGGCTAAATACCATTGCCAGTAA
TTTGGCGAATGCGGAGTCACCGGCGGCGTCTGCTGCGACGGTTTATAAAGCCCGCAGCCCGGTATTTTCAGCAGTTTATT
CGGCCCGTGCTGAAACTGAACCCCAGGGGATCCAAAGCGCACAAGTGCAGGTCTTGGATGTGGTGGAGGTTGGCGGCTCG
GTACAGCGCTATGAACCCAATCACCCAATGGCCAACCCGCAAGGTTATGTTTTTTATCCTGCGGTGAATGTGGTGTCAGA
AATGGCTGACATGATGTCAGCATCGCGCAGCTTTGAGACCAATGTTGAAGTATTGAACAGTGTGAAAAGCATGCAGCAGA
GTGTGTTAAAGCTTGGAGAGCGCTAA

Upstream 100 bases:

>100_bases
AAGCCGAGTTCTCAAAAAATGCCCTTGATTATCAGACCAGTCTGTCATTTCTCAATATGAAATTGACCGGGCTAAAGCAG
GCAATTGAAGGGAAATAAGG

Downstream 100 bases:

>100_bases
CTATGCAGATTAATGAAAGCAGAAATTCAGCCAATGTTGGCAATCAATCCCTAGCACCTGAAGGTGGCCTGCCGGGAGGG
GAGCAGTTAAATAACCAATT

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARAETEPQGIQSAQVQVLDVVEVGGS
VQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSVLKLGER

Sequences:

>Translated_141_residues
MSFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARAETEPQGIQSAQVQVLDVVEVGGS
VQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSVLKLGER
>Mature_140_residues
SFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARAETEPQGIQSAQVQVLDVVEVGGSV
QRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSVLKLGER

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=141, Percent_Identity=45.3900709219858, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15195; Mature: 15064

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARAETE
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCC
PQGIQSAQVQVLDVVEVGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFET
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHH
NVEVLNSVKSMQQSVLKLGER
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARAETE
CHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCC
PQGIQSAQVQVLDVVEVGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFET
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHH
NVEVLNSVKSMQQSVLKLGER
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]