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The map label for this gene is napB [H]

Identifier: 153949006

GI number: 153949006

Start: 1495576

End: 1496031

Strand: Direct

Name: napB [H]

Synonym: YpsIP31758_1274

Alternate gene names: 153949006

Gene position: 1495576-1496031 (Clockwise)

Preceding gene: 153950634

Following gene: 153949698

Centisome position: 31.66

GC content: 51.54

Gene sequence:

>456_bases
ATGCTTAAGTTAGTAAAGCGCAGAGTTTCAGGGGTGATATCGCTACTGGCAATATTGATGGTCATGGGCGGGGTCAATGC
GGCCAGCAATGTTGAGATGGACTTAACGCAATCACCTGAAGTCTCTGGCACCGCCGAAGGGAAGGTGAAAATGCCTAAAC
AACAAAAACGGATGGCGCTGAACTATGTTAACCAGCCACCGATGATCCCACATAGCGTGGATGGCTATCAGGTCAGTAAA
AATACTAACCGCTGCCTGCAATGCCACGGGGTTGAACACTATATCACCACGGGTGCACCCCGGGTCAGCTCAAGTCACTT
TTATGACCGTGATGGCAAAGTCTCCAGCGAAGTATCGCCGCGCCGCTACTTCTGCCTACAGTGTCATGTGCCACAAACCG
ACGCGGCACCGATTGTTGGTAATAGCTTCCAGCCAGCACCTGGCTTTGGTCAGTAA

Upstream 100 bases:

>100_bases
GCCTGATGATTCACAGATAACCATTGATTACAGATAACCATTATCCGGGAATGCCAAGGAAAAAGACGGTGTCTTTGGGG
AGCAAATAATGAATAACACA

Downstream 100 bases:

>100_bases
CCGAGATGAGTGATAAGCGAGGGCATGATGAGCGAGACTAAAAAACCCGGTTTTATCCGTCGGTTATGGCAGTGGTGGCG
TAGACCAAGTCGTCTGGCAC

Product: citrate reductase cytochrome C subunit

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MLKLVKRRVSGVISLLAILMVMGGVNAASNVEMDLTQSPEVSGTAEGKVKMPKQQKRMALNYVNQPPMIPHSVDGYQVSK
NTNRCLQCHGVEHYITTGAPRVSSSHFYDRDGKVSSEVSPRRYFCLQCHVPQTDAAPIVGNSFQPAPGFGQ

Sequences:

>Translated_151_residues
MLKLVKRRVSGVISLLAILMVMGGVNAASNVEMDLTQSPEVSGTAEGKVKMPKQQKRMALNYVNQPPMIPHSVDGYQVSK
NTNRCLQCHGVEHYITTGAPRVSSSHFYDRDGKVSSEVSPRRYFCLQCHVPQTDAAPIVGNSFQPAPGFGQ
>Mature_151_residues
MLKLVKRRVSGVISLLAILMVMGGVNAASNVEMDLTQSPEVSGTAEGKVKMPKQQKRMALNYVNQPPMIPHSVDGYQVSK
NTNRCLQCHGVEHYITTGAPRVSSSHFYDRDGKVSSEVSPRRYFCLQCHVPQTDAAPIVGNSFQPAPGFGQ

Specific function: Small subunit of the periplasmic nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme NapC protein, thus allowing electron flow between membrane and periplasm.

COG id: COG3043

COG function: function code C; Nitrate reductase cytochrome c-type subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082065, Length=147, Percent_Identity=66.6666666666667, Blast_Score=210, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005591 [H]

Pfam domain/function: PF03892 NapB [H]

EC number: NA

Molecular weight: Translated: 16503; Mature: 16503

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLVKRRVSGVISLLAILMVMGGVNAASNVEMDLTQSPEVSGTAEGKVKMPKQQKRMAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCEECCHHHHHHHH
NYVNQPPMIPHSVDGYQVSKNTNRCLQCHGVEHYITTGAPRVSSSHFYDRDGKVSSEVSP
HHCCCCCCCCCCCCCEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
RRYFCLQCHVPQTDAAPIVGNSFQPAPGFGQ
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKLVKRRVSGVISLLAILMVMGGVNAASNVEMDLTQSPEVSGTAEGKVKMPKQQKRMAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCEECCHHHHHHHH
NYVNQPPMIPHSVDGYQVSKNTNRCLQCHGVEHYITTGAPRVSSSHFYDRDGKVSSEVSP
HHCCCCCCCCCCCCCEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
RRYFCLQCHVPQTDAAPIVGNSFQPAPGFGQ
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8039676 [H]