| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is ygbM [C]
Identifier: 153948934
GI number: 153948934
Start: 2467359
End: 2467565
Strand: Reverse
Name: ygbM [C]
Synonym: YpsIP31758_2144
Alternate gene names: 153948934
Gene position: 2467565-2467359 (Counterclockwise)
Preceding gene: 153947397
Following gene: 153950533
Centisome position: 52.24
GC content: 46.86
Gene sequence:
>207_bases TTGCATTCATGGTGCGGCTTCATAGGGACTATTCAAATCACATCGGCACCTGATCACTATAAATTAGATGAAGAGGAGGG CAATCATCCGTATTTATTGATTCTGTTTGGTTGTATTACCTGTGCTGGCTGGGCTGATTGTGAGTATCAGCCATTAGTGG CTGCGACACAAGTATTGGCTTTGGGGGAGCCCCCCACCTCTCTGTAG
Upstream 100 bases:
>100_bases CACATGTCGAACGGGTCAATCTTATTGGGCGTTATAATGTAGTTGCGCAACTGAATACCTTCTATACTTAAATAATGGCG AGTCAGCTGCAACCGTTTAA
Downstream 100 bases:
>100_bases TAGACTTTTGAATTATTGCAAAAAATTTCATTGCAAGGCTATTTTATGTGAAGAATTTTCACTTTATTGCGTTAACAATA GACCATTTAAAGTGTAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MHSWCGFIGTIQITSAPDHYKLDEEEGNHPYLLILFGCITCAGWADCEYQPLVAATQVLALGEPPTSL
Sequences:
>Translated_68_residues MHSWCGFIGTIQITSAPDHYKLDEEEGNHPYLLILFGCITCAGWADCEYQPLVAATQVLALGEPPTSL >Mature_68_residues MHSWCGFIGTIQITSAPDHYKLDEEEGNHPYLLILFGCITCAGWADCEYQPLVAATQVLALGEPPTSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7438; Mature: 7438
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSWCGFIGTIQITSAPDHYKLDEEEGNHPYLLILFGCITCAGWADCEYQPLVAATQVLA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCHHHHEEEEE LGEPPTSL CCCCCCCC >Mature Secondary Structure MHSWCGFIGTIQITSAPDHYKLDEEEGNHPYLLILFGCITCAGWADCEYQPLVAATQVLA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCHHHHEEEEE LGEPPTSL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA