| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is bglX [H]
Identifier: 153948774
GI number: 153948774
Start: 629276
End: 631459
Strand: Direct
Name: bglX [H]
Synonym: YpsIP31758_0532
Alternate gene names: 153948774
Gene position: 629276-631459 (Clockwise)
Preceding gene: 153947818
Following gene: 153948598
Centisome position: 13.32
GC content: 57.74
Gene sequence:
>2184_bases ATGAGTACTGTTTATCGCGATGCCACTCTGCCCATTGAGGCTAGAATTGACGATTTGCTCAGCCAGATGACGTTGGCGGA GAAAGTGGGCCAACTGTGTCAACAGCCGATGCTGGACTATCAGCAACACCGTGACGACTATCTTGCCGGGGTACGCGCTG GCCGCTGGGGTTCACGCATTCTGGCTGATACCGCCTGGGCGGGCAATGCGCCAGGAGAAAACGTCGATCCGTGCCAGTTA AATGAAATCCAACGTGCCGCCGTAGAGCACAGCCGCCTGGGTATTCCGCTGTTGTTTGCCCGTGACGTGATTTACGGGCA GGCGACGGTGCTGCCGATACCCCTGGCGCAGGCGGCTTCCTGGAACCCCGAGCTGGTACAGCAGGCCTACCGCGTTATCG CCCGCGAGGCGGCTTCGTTAGGTATCCACTGGACCTTCGCCCCGATGCTGGATATTGCGCGCGATCCGCGCTGGGGGCGA ACCATCGAAACCAGTGGGGAAGATCCCTGGCTCACCGCGCAGTTCGCCGCCGCTGTCGTCAAAGGATTTCAAGGGGACGA TCTCAGCGCCGCCGATAGCCTGATGGCTTGTGCCAAGCACTTTGTCGGCTATGCCGCCGTGGAGGGGGGCCGCGACTACG ATACCACCGAGCTGTCCGACAACACGCTGCACAATGTGCATCTGCCGCCATTCCAAGCGGCGATAGAGGCAGGCGTTGGC TCGGTGATGACCGGTTTTTGCGATCTCGGCGGTACGCCGGTCACTGCACATGGTGAACTGATACGCGGTTGGCTGAAACA GCAGCAGAACTTTGACGGCCTGGTGATCAGCGATTGGGGTTCGATTGCGGATCTGACTCACTTTGGTATTGCTCAAGATG CACTGAGAGCAGCAGAATTGGCGCTGCAGGCCGGTGTCGATATGGCCATGACCCATGAGGCCTATGAAGATAAGCTGGAT CAACTGGTGTTACAGGGGCGGATCAAGGAAGCGTTGCTGGATGACGCAGTGCGTCGGGTGCTACGCGCCAAGTTCCGCTG TGGCCTGTTTGAACGCCCTTATGTTGATGAAGAGTGGCATAAGCGCGAGCTGCGCCGTCCTGAGCATCTGGCTCTGGCAC AGCGGTTGGCAGAGCAGTCGATCGTACTGCTGAAAAACCGGCAGGCGCTGCTGCCAATCTCCAGAACATCCGTACCACTG ACGCTGGCGGTGATCGGCCCACACGCCCATTCGCAGCGCCAGCATCTTGGCTCCTGGTGTCTGGACGGCGACGCCGACCA AGTGATGTCGATCTATCAATCCCTCTGCGCTATCGCAGGGGAGGTTAAGGTGATTACTGAGCAGAGTAGTTTTAGCGATG AGATGATCGAATGTGCCCATCGGGCCGATATCGTTATTCTCTGTACCGGCGAGAGCCACCGCCGCACTGGTGAAGCGCGC AATATCGCCGAACTTCAGCTACCGCCGGGACAGGAAGAGTTGATCGCTGCGGTCGGGCGCACCGGTAAACCGCTGGTGGT AATCCAGTGCACTGGCCGCCCGTTACCATCACCAGCAACCGAGCAGTACGCCGATGCGCTGTTATATGGCTGGCAGTGCG GTAGTGAAGCGGGTAAGGCGATCGCTCGCATTATTTTCGGCGAACAGGTTCCCTGTGGCAAATTACCGATGACGGTGCCA CGTAGTACCGGTCAGATCCCGATTTATTATGGCCGCAAGCCACTGGGTAAAATGCGCGACTATCGTGAATATCAGCCCTA TAAAGATCTGGCGGATACACCGCTGTATCCCTTTGGTTTTGGCCTGAGTTATACCCGATTTACCTATAGCGATTTGCAGT TGAGCCATGAATCACTCGAACTGGGAGCATCGCTACGGGTGACAATGACCGTCACCAACGATGGTGCAGTGGCTGGGGAT GAGGTTGTACAGTGCTATATTCGCCAGTACGTCGCCAGCACCACGCGGCCACAGCGTGAACTGAAAGGTTTCCAACGTAT CAGCCTGCAGCCGGGGGAATCGGGCGAGGTCAGCTTCACGCTGGGAGTGCGCGAGCTGGCATTTTACGGCCAACATCGCC GCTATGCGCAGGAGCCGTCGCGTATCAGCGTATTTGTCGGTGGCGACTCAACGACGCCACATCAGGCGGATTTTACGCTG TTTGAAAATCTTTACACTGTTTGA
Upstream 100 bases:
>100_bases CCTTGCGTACCTCTTCGCAGCTCGATGCTGGCTGCAATACCGATAGCTAACCCCGCCATGCGGCAGAGTGATCGGGAGAT TACCTGATTTGGAGAACACT
Downstream 100 bases:
>100_bases AAATAGAGAGGCCCCATTTTGAGAGGTAAGAGGATACCTAATGGAATTGGGGCCATTCACTCTTTAATGAAGCAGCTCCA AAGGCGGTGAGGTGTTGGTC
Product: periplasmic beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MSTVYRDATLPIEARIDDLLSQMTLAEKVGQLCQQPMLDYQQHRDDYLAGVRAGRWGSRILADTAWAGNAPGENVDPCQL NEIQRAAVEHSRLGIPLLFARDVIYGQATVLPIPLAQAASWNPELVQQAYRVIAREAASLGIHWTFAPMLDIARDPRWGR TIETSGEDPWLTAQFAAAVVKGFQGDDLSAADSLMACAKHFVGYAAVEGGRDYDTTELSDNTLHNVHLPPFQAAIEAGVG SVMTGFCDLGGTPVTAHGELIRGWLKQQQNFDGLVISDWGSIADLTHFGIAQDALRAAELALQAGVDMAMTHEAYEDKLD QLVLQGRIKEALLDDAVRRVLRAKFRCGLFERPYVDEEWHKRELRRPEHLALAQRLAEQSIVLLKNRQALLPISRTSVPL TLAVIGPHAHSQRQHLGSWCLDGDADQVMSIYQSLCAIAGEVKVITEQSSFSDEMIECAHRADIVILCTGESHRRTGEAR NIAELQLPPGQEELIAAVGRTGKPLVVIQCTGRPLPSPATEQYADALLYGWQCGSEAGKAIARIIFGEQVPCGKLPMTVP RSTGQIPIYYGRKPLGKMRDYREYQPYKDLADTPLYPFGFGLSYTRFTYSDLQLSHESLELGASLRVTMTVTNDGAVAGD EVVQCYIRQYVASTTRPQRELKGFQRISLQPGESGEVSFTLGVRELAFYGQHRRYAQEPSRISVFVGGDSTTPHQADFTL FENLYTV
Sequences:
>Translated_727_residues MSTVYRDATLPIEARIDDLLSQMTLAEKVGQLCQQPMLDYQQHRDDYLAGVRAGRWGSRILADTAWAGNAPGENVDPCQL NEIQRAAVEHSRLGIPLLFARDVIYGQATVLPIPLAQAASWNPELVQQAYRVIAREAASLGIHWTFAPMLDIARDPRWGR TIETSGEDPWLTAQFAAAVVKGFQGDDLSAADSLMACAKHFVGYAAVEGGRDYDTTELSDNTLHNVHLPPFQAAIEAGVG SVMTGFCDLGGTPVTAHGELIRGWLKQQQNFDGLVISDWGSIADLTHFGIAQDALRAAELALQAGVDMAMTHEAYEDKLD QLVLQGRIKEALLDDAVRRVLRAKFRCGLFERPYVDEEWHKRELRRPEHLALAQRLAEQSIVLLKNRQALLPISRTSVPL TLAVIGPHAHSQRQHLGSWCLDGDADQVMSIYQSLCAIAGEVKVITEQSSFSDEMIECAHRADIVILCTGESHRRTGEAR NIAELQLPPGQEELIAAVGRTGKPLVVIQCTGRPLPSPATEQYADALLYGWQCGSEAGKAIARIIFGEQVPCGKLPMTVP RSTGQIPIYYGRKPLGKMRDYREYQPYKDLADTPLYPFGFGLSYTRFTYSDLQLSHESLELGASLRVTMTVTNDGAVAGD EVVQCYIRQYVASTTRPQRELKGFQRISLQPGESGEVSFTLGVRELAFYGQHRRYAQEPSRISVFVGGDSTTPHQADFTL FENLYTV >Mature_726_residues STVYRDATLPIEARIDDLLSQMTLAEKVGQLCQQPMLDYQQHRDDYLAGVRAGRWGSRILADTAWAGNAPGENVDPCQLN EIQRAAVEHSRLGIPLLFARDVIYGQATVLPIPLAQAASWNPELVQQAYRVIAREAASLGIHWTFAPMLDIARDPRWGRT IETSGEDPWLTAQFAAAVVKGFQGDDLSAADSLMACAKHFVGYAAVEGGRDYDTTELSDNTLHNVHLPPFQAAIEAGVGS VMTGFCDLGGTPVTAHGELIRGWLKQQQNFDGLVISDWGSIADLTHFGIAQDALRAAELALQAGVDMAMTHEAYEDKLDQ LVLQGRIKEALLDDAVRRVLRAKFRCGLFERPYVDEEWHKRELRRPEHLALAQRLAEQSIVLLKNRQALLPISRTSVPLT LAVIGPHAHSQRQHLGSWCLDGDADQVMSIYQSLCAIAGEVKVITEQSSFSDEMIECAHRADIVILCTGESHRRTGEARN IAELQLPPGQEELIAAVGRTGKPLVVIQCTGRPLPSPATEQYADALLYGWQCGSEAGKAIARIIFGEQVPCGKLPMTVPR STGQIPIYYGRKPLGKMRDYREYQPYKDLADTPLYPFGFGLSYTRFTYSDLQLSHESLELGASLRVTMTVTNDGAVAGDE VVQCYIRQYVASTTRPQRELKGFQRISLQPGESGEVSFTLGVRELAFYGQHRRYAQEPSRISVFVGGDSTTPHQADFTLF ENLYTV
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=754, Percent_Identity=37.4005305039788, Blast_Score=496, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 80324; Mature: 80193
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVYRDATLPIEARIDDLLSQMTLAEKVGQLCQQPMLDYQQHRDDYLAGVRAGRWGSRI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LADTAWAGNAPGENVDPCQLNEIQRAAVEHSRLGIPLLFARDVIYGQATVLPIPLAQAAS HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHCCC WNPELVQQAYRVIAREAASLGIHWTFAPMLDIARDPRWGRTIETSGEDPWLTAQFAAAVV CCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCEEECCCCCCEEHHHHHHHHH KGFQGDDLSAADSLMACAKHFVGYAAVEGGRDYDTTELSDNTLHNVHLPPFQAAIEAGVG HCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH SVMTGFCDLGGTPVTAHGELIRGWLKQQQNFDGLVISDWGSIADLTHFGIAQDALRAAEL HHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH ALQAGVDMAMTHEAYEDKLDQLVLQGRIKEALLDDAVRRVLRAKFRCGLFERPYVDEEWH HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KRELRRPEHLALAQRLAEQSIVLLKNRQALLPISRTSVPLTLAVIGPHAHSQRQHLGSWC HHHHCCCHHHHHHHHHHHCCEEEEECCCEECEEECCCCCEEEEEECCCCHHHHHHHHCCC LDGDADQVMSIYQSLCAIAGEVKVITEQSSFSDEMIECAHRADIVILCTGESHRRTGEAR CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCHHCCCCCC NIAELQLPPGQEELIAAVGRTGKPLVVIQCTGRPLPSPATEQYADALLYGWQCGSEAGKA CEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHH IARIIFGEQVPCGKLPMTVPRSTGQIPIYYGRKPLGKMRDYREYQPYKDLADTPLYPFGF HHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHCCCCCCCCCC GLSYTRFTYSDLQLSHESLELGASLRVTMTVTNDGAVAGDEVVQCYIRQYVASTTRPQRE CCCCCEEEHHHHHHCHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH LKGFQRISLQPGESGEVSFTLGVRELAFYGQHRRYAQEPSRISVFVGGDSTTPHQADFTL HHHHHEEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH FENLYTV HHHHHCC >Mature Secondary Structure STVYRDATLPIEARIDDLLSQMTLAEKVGQLCQQPMLDYQQHRDDYLAGVRAGRWGSRI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LADTAWAGNAPGENVDPCQLNEIQRAAVEHSRLGIPLLFARDVIYGQATVLPIPLAQAAS HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHCCC WNPELVQQAYRVIAREAASLGIHWTFAPMLDIARDPRWGRTIETSGEDPWLTAQFAAAVV CCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCEEECCCCCCEEHHHHHHHHH KGFQGDDLSAADSLMACAKHFVGYAAVEGGRDYDTTELSDNTLHNVHLPPFQAAIEAGVG HCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH SVMTGFCDLGGTPVTAHGELIRGWLKQQQNFDGLVISDWGSIADLTHFGIAQDALRAAEL HHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH ALQAGVDMAMTHEAYEDKLDQLVLQGRIKEALLDDAVRRVLRAKFRCGLFERPYVDEEWH HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KRELRRPEHLALAQRLAEQSIVLLKNRQALLPISRTSVPLTLAVIGPHAHSQRQHLGSWC HHHHCCCHHHHHHHHHHHCCEEEEECCCEECEEECCCCCEEEEEECCCCHHHHHHHHCCC LDGDADQVMSIYQSLCAIAGEVKVITEQSSFSDEMIECAHRADIVILCTGESHRRTGEAR CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCHHCCCCCC NIAELQLPPGQEELIAAVGRTGKPLVVIQCTGRPLPSPATEQYADALLYGWQCGSEAGKA CEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHH IARIIFGEQVPCGKLPMTVPRSTGQIPIYYGRKPLGKMRDYREYQPYKDLADTPLYPFGF HHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHCCCCCCCCCC GLSYTRFTYSDLQLSHESLELGASLRVTMTVTNDGAVAGDEVVQCYIRQYVASTTRPQRE CCCCCEEEHHHHHHCHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH LKGFQRISLQPGESGEVSFTLGVRELAFYGQHRRYAQEPSRISVFVGGDSTTPHQADFTL HHHHHEEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH FENLYTV HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]