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The map label for this gene is yfcI [C]

Identifier: 153948767

GI number: 153948767

Start: 4201125

End: 4202057

Strand: Reverse

Name: yfcI [C]

Synonym: YpsIP31758_3726

Alternate gene names: 153948767

Gene position: 4202057-4201125 (Counterclockwise)

Preceding gene: 153950112

Following gene: 153950657

Centisome position: 88.96

GC content: 47.8

Gene sequence:

>933_bases
ATGAAAACGACCCCTACGCCCCATGATGCTATTTTTAAACAATTTCTTACCCATCAACAAACTGCCCGCGACTTTTTGGA
GATTCATTTACCACCTGAATTCCGGAAAATCTGTGACCTAAATACTTTACAGCTGGAATCCAGTAGTTTTATCGAAAATG
ACCTGCGCCCCTACTATTCTGACGTGCTTTACTCGCTAAAAACGCAGACGCAGGACGGATATGTTTACGCGCTGATTGAA
CATCAAAGTACCCCCGACAAGCATATGGCTTTTCGGTTGATGCGCTATGCCATCGCGGCCATGCAACGCCATCTTGATGC
AGGTAACGACAAGCTGCCGCTGGTTATTCCTATTTTGTTCTACCATGGGCAGGTCACGCCGTACCCGTATCCAATGAGCT
GGCTGCAAACGTTCAGCCTGCCAACACTTGCTGATCAGCTCTATAGCGGTAATTTCCCGCTGGTTGATGTGACGGTGATC
CCCGATGATGAAATCATGACCCATCGGGGTATTGCTATGCTGGAACTGTTACAGAAACACATTCGTCGGCGCGATATGTC
CGAATTATCGGATCAATTGGTCATACTGTTATCTAGCGGTTACACTACGGATGATCAGCTAATATCATTGATGAATTACA
TGCTACAAGATGGCGACGCTGCTACCCCGAAAACCTTTATCTGGGAACTGGCCCGTCGTTCGCCACAGCACAAGGAGTTA
CTTATGACGATTGCCCAAAAATTGAAACAAGAAGGCCGTCAAGAAGGCCGTCAAGAAGGCCGCGTGGAAGGAATACAGAT
CGGCGAGGCTAATGGGCTTAAGAAAGGCAAGTTGGAAGTTGCCCGCACTATGTTGGCCAATGGCCTTGACCGTGCCACGG
TAATGAAAATGACGGGTCTAAGTGATGAAGATCTCACGCAGATCCACCATTAA

Upstream 100 bases:

>100_bases
TAGCTAGTTGGTATCTATGGTATTAGAGGTTAATGTCCAGTTTGTCCTAAAGTGGTTGTGAGTGATTGCTCACACTGATA
TCCATGACTATCATCCCCCG

Downstream 100 bases:

>100_bases
TCATTCGTATCGATGATCTGATGCAGACATCTGTGGACGATACTGAATACTGAGATAACCCTGATAAAGGGTTATCTGCG
GTTTATTTGTCAATATGCAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKTTPTPHDAIFKQFLTHQQTARDFLEIHLPPEFRKICDLNTLQLESSSFIENDLRPYYSDVLYSLKTQTQDGYVYALIE
HQSTPDKHMAFRLMRYAIAAMQRHLDAGNDKLPLVIPILFYHGQVTPYPYPMSWLQTFSLPTLADQLYSGNFPLVDVTVI
PDDEIMTHRGIAMLELLQKHIRRRDMSELSDQLVILLSSGYTTDDQLISLMNYMLQDGDAATPKTFIWELARRSPQHKEL
LMTIAQKLKQEGRQEGRQEGRVEGIQIGEANGLKKGKLEVARTMLANGLDRATVMKMTGLSDEDLTQIHH

Sequences:

>Translated_310_residues
MKTTPTPHDAIFKQFLTHQQTARDFLEIHLPPEFRKICDLNTLQLESSSFIENDLRPYYSDVLYSLKTQTQDGYVYALIE
HQSTPDKHMAFRLMRYAIAAMQRHLDAGNDKLPLVIPILFYHGQVTPYPYPMSWLQTFSLPTLADQLYSGNFPLVDVTVI
PDDEIMTHRGIAMLELLQKHIRRRDMSELSDQLVILLSSGYTTDDQLISLMNYMLQDGDAATPKTFIWELARRSPQHKEL
LMTIAQKLKQEGRQEGRQEGRVEGIQIGEANGLKKGKLEVARTMLANGLDRATVMKMTGLSDEDLTQIHH
>Mature_310_residues
MKTTPTPHDAIFKQFLTHQQTARDFLEIHLPPEFRKICDLNTLQLESSSFIENDLRPYYSDVLYSLKTQTQDGYVYALIE
HQSTPDKHMAFRLMRYAIAAMQRHLDAGNDKLPLVIPILFYHGQVTPYPYPMSWLQTFSLPTLADQLYSGNFPLVDVTVI
PDDEIMTHRGIAMLELLQKHIRRRDMSELSDQLVILLSSGYTTDDQLISLMNYMLQDGDAATPKTFIWELARRSPQHKEL
LMTIAQKLKQEGRQEGRQEGRVEGIQIGEANGLKKGKLEVARTMLANGLDRATVMKMTGLSDEDLTQIHH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=310, Percent_Identity=56.1290322580645, Blast_Score=352, Evalue=2e-98,
Organism=Escherichia coli, GI1788577, Length=307, Percent_Identity=54.071661237785, Blast_Score=344, Evalue=5e-96,
Organism=Escherichia coli, GI1789816, Length=305, Percent_Identity=54.7540983606557, Blast_Score=340, Evalue=7e-95,
Organism=Escherichia coli, GI1786324, Length=297, Percent_Identity=52.8619528619529, Blast_Score=316, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 35560; Mature: 35560

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTPTPHDAIFKQFLTHQQTARDFLEIHLPPEFRKICDLNTLQLESSSFIENDLRPYYS
CCCCCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCEEECCHHHHHHHHHHHHH
DVLYSLKTQTQDGYVYALIEHQSTPDKHMAFRLMRYAIAAMQRHLDAGNDKLPLVIPILF
HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHH
YHGQVTPYPYPMSWLQTFSLPTLADQLYSGNFPLVDVTVIPDDEIMTHRGIAMLELLQKH
HCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCHHHHHCCHHHHHHHHHH
IRRRDMSELSDQLVILLSSGYTTDDQLISLMNYMLQDGDAATPKTFIWELARRSPQHKEL
HHHCCHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHH
LMTIAQKLKQEGRQEGRQEGRVEGIQIGEANGLKKGKLEVARTMLANGLDRATVMKMTGL
HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC
SDEDLTQIHH
CHHHHHHHCC
>Mature Secondary Structure
MKTTPTPHDAIFKQFLTHQQTARDFLEIHLPPEFRKICDLNTLQLESSSFIENDLRPYYS
CCCCCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCEEECCHHHHHHHHHHHHH
DVLYSLKTQTQDGYVYALIEHQSTPDKHMAFRLMRYAIAAMQRHLDAGNDKLPLVIPILF
HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHH
YHGQVTPYPYPMSWLQTFSLPTLADQLYSGNFPLVDVTVIPDDEIMTHRGIAMLELLQKH
HCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCHHHHHCCHHHHHHHHHH
IRRRDMSELSDQLVILLSSGYTTDDQLISLMNYMLQDGDAATPKTFIWELARRSPQHKEL
HHHCCHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHH
LMTIAQKLKQEGRQEGRQEGRVEGIQIGEANGLKKGKLEVARTMLANGLDRATVMKMTGL
HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC
SDEDLTQIHH
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]