| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948765
Identifier: 153948765
GI number: 153948765
Start: 58771
End: 59781
Strand: Reverse
Name: 153948765
Synonym: YpsIP31758_0050
Alternate gene names: NA
Gene position: 59781-58771 (Counterclockwise)
Preceding gene: 153947153
Following gene: 153948323
Centisome position: 1.27
GC content: 48.96
Gene sequence:
>1011_bases ATGACTATTCAAAACATGGCAAATAGCCGTGACGGATACCCCTACGCCCAAAACATGGCGAACGGTATTAACGAAATTCG TCGTAACGTTATTTGTGGTGACTGGTCAGCCGTTAATAATCGTGTTTGCACATTAACGGATTTAGGCTTGCGTCATAACG GTCAGGGGCTTGTATGGCTGCGTTCTGGTGTGCCAGTCCGTGAGGCGGATAGCGATACTGGGTTCAGTGGTAAAGCGAAG GTATCCCATGAGTACCATGAGTCGCTATGTCCATCACGTCCAGCAGATAACAAGGGTTTCATCCGTGGCGTTCACTCTCA TAAAGTTGATGGTTATTGCCTGAATATCCTCACCAGCAGCCCGTCATGGATTGAGTACTGGCATCGGCGTGATGGTAAGG CTCTTTCTACTTTCGCCGTTCAGGTACTCACTAATGAGCGTCAGGAAGCCTTTGACGATTGGGGCATTTATCGCAGCCCG GCGCAGCCAGATAAATACACAGTGATTAATACGGTGCGTAATAGCTCGACGGTGAAGGAATATCAGCGTTTGGGCTGGGT ATGTGAATCAGCGCATGAGCTATCGTTGCTGGTTAAGAACGATGCTGAGTTTAGCCGTCTGATGGGCCGGTTGGGTTACG TGAAAATCCGAACCCGCAAAATTACCGGACGAAAGGAGGCTTTCTGGATTTATCGTTCAGCAGAAAAAGGATTATCGGCG GCAGAGAAGCAACCCCTAATGGATGCAAGTTATTCTGATGTAGTTAAGCGTATTTCTCGCGGTAAACAAGAGGTATGCCC GGAAGGAGCCGCACCACACAAGGCCTCAGAGCCATTTGTGCAGGTGTCACACAAGCCTCGATATGGTTATAACGAGGTTG CTGTAGATGGAAAGTTACTTCATGTATACGGCGACCACATCCGTTTACTGACTAAAAAGCGGGTTCGTGTGAATGGTAAG CAGGTTCAGGGCTACACAGCTAAAGGTCTGCGTGTGGAGGTGGTGGGATGA
Upstream 100 bases:
>100_bases CCTTATATAACGGCCACCAGCAATTAACCAAGAACGAAATTAACGACATCTTATATTTATACCCGGACACACCAGTCGCC GCATAACGGAGCATAAAAAT
Downstream 100 bases:
>100_bases TACTCACAACTCCAGTGGACAGCCAGAAACAAGCCTTTCCCCTGGCTGGCAGTATCCAAACTCAGCCTGAATCCAGCCAG AGTGATATTTCCAGCAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTIQNMANSRDGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWLRSGVPVREADSDTGFSGKAK VSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSSPSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWGIYRSP AQPDKYTVINTVRNSSTVKEYQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVAVDGKLLHVYGDHIRLLTKKRVRVNGK QVQGYTAKGLRVEVVG
Sequences:
>Translated_336_residues MTIQNMANSRDGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWLRSGVPVREADSDTGFSGKAK VSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSSPSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWGIYRSP AQPDKYTVINTVRNSSTVKEYQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVAVDGKLLHVYGDHIRLLTKKRVRVNGK QVQGYTAKGLRVEVVG >Mature_335_residues TIQNMANSRDGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWLRSGVPVREADSDTGFSGKAKV SHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSSPSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWGIYRSPA QPDKYTVINTVRNSSTVKEYQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSAA EKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVAVDGKLLHVYGDHIRLLTKKRVRVNGKQ VQGYTAKGLRVEVVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37885; Mature: 37754
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQNMANSRDGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWL CCCCCCCCCCCCCCHHHHHHHHHHHHHHCEECCCHHHHCCCEEEEEECCCEECCCEEEEE RSGVPVREADSDTGFSGKAKVSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSS ECCCCCCCCCCCCCCCCCEECCHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEECC PSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWGIYRSPAQPDKYTVINTVRNSSTVKE CHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHH YQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA HHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEECCCCEEEEEEECHHHCCHH AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVAVDGKLL HHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCEEE HVYGDHIRLLTKKRVRVNGKQVQGYTAKGLRVEVVG EEECCHHEEEEHHHHEECCEEECCEEECCEEEEEEC >Mature Secondary Structure TIQNMANSRDGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWL CCCCCCCCCCCCCHHHHHHHHHHHHHHCEECCCHHHHCCCEEEEEECCCEECCCEEEEE RSGVPVREADSDTGFSGKAKVSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSS ECCCCCCCCCCCCCCCCCEECCHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEECC PSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWGIYRSPAQPDKYTVINTVRNSSTVKE CHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHH YQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA HHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEECCCCEEEEEEECHHHCCHH AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVAVDGKLL HHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCEEE HVYGDHIRLLTKKRVRVNGKQVQGYTAKGLRVEVVG EEECCHHEEEEHHHHEECCEEECCEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA