Click here to switch to the map view.

The map label for this gene is trg [H]

Identifier: 153948745

GI number: 153948745

Start: 1892260

End: 1893999

Strand: Reverse

Name: trg [H]

Synonym: YpsIP31758_1631

Alternate gene names: 153948745

Gene position: 1893999-1892260 (Counterclockwise)

Preceding gene: 153947978

Following gene: 153949016

Centisome position: 40.1

GC content: 47.7

Gene sequence:

>1740_bases
ATGAAACGTGGAAGTGCGCACAAGCCATTGGATATGAAAATAGCACCAGAGCCGAATAAAGATACCAAAGTGTCCTTTAT
CAATAATATGCGTCTGGTCACTTTGTTTATCGTCATATTGGCGGGAATATTGCTTTTATTTGCCGCCGCTATTGGGACAT
CGGGCTACTTTTTAAAACAAAGTAACCAATCTTTGGCGCAAGCGACGCAAGAGATCGACATCCGTCAGGGTCTGTCTAAC
AGCTCTAATCATCTACGAACCGCCCGTCTTATTCTGATCCAGGCCGCCTCCTCCGCACGTATTGGTGATGCTACAGGCTA
TCAGCAAGGCCTAAAAAATGCAGAAGGCCGCATAGCTCAGTCACAGCAAATGTTCGACCTTTATTATAATCGGCCAACAA
AATCTGAAACGGATATTACGCTGGATGTACCACTGAAAAAAGCCTACGAACAATATCGTGACGACGGAATGAAACCCATG
TTAGCGGCAACGAAAGAGGGCCACTTTGAAGAAGTTATCTCTCTTGATGCTGAGAAAATCAGTCTGCTAGACGACGGCTA
TAACGAACCACTGCTGAAAGCCGTTAAATATCGTACAGAGCAAGCGAACCAGATTAACCAGTCCGCTCACCAAGAAGCGC
GCCTTGGTTACATTCTCATGGCGGGGGCTTTTGTCTTGGTTATCTTATTAACAATGATTGCTTTCTTAGTCATCAGTAAG
GTAATCATCAATCCAATTAATTGGTTGGTCACCCGTATTCAGCGGATTGCTCAGGGGGATTTGACGCAATCTCCCGTCTC
ATTTGGCCGTAATGAAATTGGCGTACTGGGAAGTAATATCCAGCAAATGCAGGATGCATTAGCCATCACAGTTGAAGCGG
TGCGCAGCAGTGCTGAATCTATCTATCAAGGATCCAGCGAAATCGCCTTGGGGAATACTGACCTTTCAGCACGCACAGAG
CAGCAAGCCGCTTCACTTGAACAAACTGCGGCCAGCATGGAGCAACTGACCGCAACCGTGAAACAGAATGCTGAAAACGC
CCATCACGCGAGCCAACTGGCCGCGAATGCATCGGGTAAAGCAGCTCAAGGTGGTGATATTGTCAGTGATGTTGTCAGCA
CCATGGATAAAATATCTCTCAGCTCCATGAAAATTGCTGAAATAACGAATGTTATTAATAGCATTGCGTTCCAAACTAAT
ATTTTGGCACTGAACGCGGCGGTAGAAGCCGCGCGCGCGGGCGAACAAGGGCGCGGTTTTGCTGTAGTGGCCAGTGAAGT
ACGCCACCTGGCGCAGCGCAGCGCAGATGCCGCAAAAGAAATTGAGTCGCTGATTGAAGCCTCAGTTGATTTAATTGGTG
ACGGTTCAATTCTGGTTTCAAATGCGGGTAAAACAATGAACGAGATTGTCACAGCAGTCACTCACGTCACTGATATCATG
GGTGAAATTGCATCAGCTTCCGATGAGCAAAGCCGCGGCATCAGCCAGGTTGCGCAAGCCGTATCTGAAATGGATAACGT
TACTCAGCAGAACGCCTCTTTAGTGCAGGAAGCCTCCGCAGCGGCAGCCTCTCTGGAGCAACAAGCTGAAATATTGACTC
AAGCGGTCGCGGTCTTCCAGCTTGCGGGTCACTCGTCTATCAAGGAATTTAAAAGCCCTGTCTCCCCTCCTACAGGCCAA
AATGGTTCTGGCATCAATAAGAAGCCAACGGATGGTTCACTGAATTGGGAAACTTTCTAA

Upstream 100 bases:

>100_bases
GCAATGTTGGGATAATTTCAGATATCTCCCCTAAATAATTCGTAGCAATGCCTATCAGGCAAGGCCCCTCCCTCAAGCAA
CTATAAAAACGGAACTAAAA

Downstream 100 bases:

>100_bases
GCAAGCAATCTTTGTTGGCCATTTCAGATGCAGCTTATTCATCTAAGTGATGCCGGGAAGTGAGTGGCCGCTTAAAATAC
CAGGGAAGATAAAAAGCAAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQSNQSLAQATQEIDIRQGLSN
SSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQSQQMFDLYYNRPTKSETDITLDVPLKKAYEQYRDDGMKPM
LAATKEGHFEEVISLDAEKISLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTMIAFLVISK
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAESIYQGSSEIALGNTDLSARTE
QQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGKAAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTN
ILALNAAVEAARAGEQGRGFAVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQLAGHSSIKEFKSPVSPPTGQ
NGSGINKKPTDGSLNWETF

Sequences:

>Translated_579_residues
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQSNQSLAQATQEIDIRQGLSN
SSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQSQQMFDLYYNRPTKSETDITLDVPLKKAYEQYRDDGMKPM
LAATKEGHFEEVISLDAEKISLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTMIAFLVISK
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAESIYQGSSEIALGNTDLSARTE
QQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGKAAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTN
ILALNAAVEAARAGEQGRGFAVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQLAGHSSIKEFKSPVSPPTGQ
NGSGINKKPTDGSLNWETF
>Mature_579_residues
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQSNQSLAQATQEIDIRQGLSN
SSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQSQQMFDLYYNRPTKSETDITLDVPLKKAYEQYRDDGMKPM
LAATKEGHFEEVISLDAEKISLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTMIAFLVISK
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAESIYQGSSEIALGNTDLSARTE
QQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGKAAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTN
ILALNAAVEAARAGEQGRGFAVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQLAGHSSIKEFKSPVSPPTGQ
NGSGINKKPTDGSLNWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=539, Percent_Identity=57.8849721706865, Blast_Score=576, Evalue=1e-165,
Organism=Escherichia coli, GI1788195, Length=342, Percent_Identity=60.233918128655, Blast_Score=354, Evalue=1e-98,
Organism=Escherichia coli, GI2367378, Length=417, Percent_Identity=53.7170263788969, Blast_Score=348, Evalue=8e-97,
Organism=Escherichia coli, GI1788194, Length=555, Percent_Identity=41.981981981982, Blast_Score=331, Evalue=9e-92,
Organism=Escherichia coli, GI1789453, Length=317, Percent_Identity=41.0094637223975, Blast_Score=224, Evalue=8e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 61957; Mature: 61957

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50885 HAMP ; PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQ
CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
SNQSLAQATQEIDIRQGLSNSSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQ
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEECCCCCCCCCHHHHHHHCCCCCHHHH
SQQMFDLYYNRPTKSETDITLDVPLKKAYEQYRDDGMKPMLAATKEGHFEEVISLDAEKI
HHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCHHHH
SLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTMIAFLVISK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAES
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IYQGSSEIALGNTDLSARTEQQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGK
HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
AAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTNILALNAAVEAARAGEQGRGF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHH
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQ
HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGHSSIKEFKSPVSPPTGQNGSGINKKPTDGSLNWETF
HHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRGSAHKPLDMKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQ
CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
SNQSLAQATQEIDIRQGLSNSSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQ
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEECCCCCCCCCHHHHHHHCCCCCHHHH
SQQMFDLYYNRPTKSETDITLDVPLKKAYEQYRDDGMKPMLAATKEGHFEEVISLDAEKI
HHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCHHHH
SLLDDGYNEPLLKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTMIAFLVISK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIINPINWLVTRIQRIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAES
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IYQGSSEIALGNTDLSARTEQQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGK
HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
AAQGGDIVSDVVSTMDKISLSSMKIAEITNVINSIAFQTNILALNAAVEAARAGEQGRGF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AVVASEVRHLAQRSADAAKEIESLIEASVDLIGDGSILVSNAGKTMNEIVTAVTHVTDIM
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHH
GEIASASDEQSRGISQVAQAVSEMDNVTQQNASLVQEASAAAASLEQQAEILTQAVAVFQ
HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGHSSIKEFKSPVSPPTGQNGSGINKKPTDGSLNWETF
HHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]