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The map label for this gene is ydcJ [H]

Identifier: 153948714

GI number: 153948714

Start: 2917795

End: 2919231

Strand: Direct

Name: ydcJ [H]

Synonym: YpsIP31758_2575

Alternate gene names: 153948714

Gene position: 2917795-2919231 (Clockwise)

Preceding gene: 153947625

Following gene: 153946928

Centisome position: 61.77

GC content: 48.99

Gene sequence:

>1437_bases
ATGAACCCCCAACAGTTTGTGCATCCCGATGAGATACGGACCAAATTCTCCAGTGCTATGTCGGGTATGTATCAGGCCGA
AGTCCCCCTATATAGCACATTATTACGGCTCGTCGCGGATACGAATACACAGGAGATGGCACAGAATCAGGAACTTACCC
GTCATTTGCAGCAAACAGGGGAAATTGAACGCCTAACGATGGAAAGACATGGCGCCATCCGCGTCGGGACAGCCGAAGAA
CTCCAGATGCTACGGCGCTTGTTTGCGGTCATGGGAATGGTGCCGGTCGGTTATTATGATTTAGCACCAGCGGGTGTCCC
GGTTCACTCCACCGCCTTCCGTGCGGTGCATGAAACCTCACTGCAAGCCTGCCCTTTCAGAGTCTTCACCTCATTACTGC
GTCTGGAGTTAATTGAGCAACCTACACTACGGCAACTGGCTGCGGATATTCTGGCGAAAAGAACAATTTTCACCCCACAG
GCGATTAAACTAATTGTTCAGCATGAAACATCGGGGGGGCTCAATCGCCATCAAGCCGATGATTTCATTGCTCAGTCGCT
GGAAACATTTCGCTGGCATCATCAGGCAACGGTCAGCACTGAAACCTACCAACAGCTACACGATCAACACCGTCTGATTG
CTGATGTGGTCGCTTTCAAAGGTCCGCATATTAACCACCTAACTCCACGGACCTTAAATATCGACGTCGTACAAACAGCA
ATGGCAGAGCATAATATGATGCCCAAAGCCGTTATCGAAGGGCCACCCCCCCGCCACTGCCCAATACTGTTACGCCAAAC
CAGCTTCAAGGCGCTGGAGGAAAAAATCGCGTTTGTATCAAATGGTGGGCAAATAATACCAGGCCACCATACGGCCCGCT
TCGGGGAGATAGAGCAACGAGGAGCCGCTTTGACGGCCAAAGGCCGTAATCTGTATGACCACTTACTGCAAAGCGCACAG
GATCAATTGAACGTTCCTGTAAATGAGAACAATGCGGCGCAATATAGCGCGATCCTGAGCGAGAAATTTAGTCAATTCCC
TGATGATTACCCAACAATGCGAGCAGAGAAACTCGCCTTCTTCCGCTATTTTCCTACAGAAAAAGGCCTTATCACTGCAT
CAATACAGGAAATACAGGAAATACAGGAAATACAGGAAATACAGGAAATGACATTAGACGAACTTATTGATAACGGCTTT
ATTCAATATGAACCGTTGGTTTATGAAGATTTCCTGCCAGTCAGCGCCGCTGGAATATTCCAGTCAAACTTAGGCGAGAA
AGGGCAGAGTCACTTTACCGGGCACTCCAATAAAGCAGACTTCCAGCGGGATTTGGGGATTGCGGTTATTGATGAACTGC
AACTCTACGAAGCAACCCAGCAACGTTCCGTTGCTGAATGTGCAGCCGCCCTCAAACTAACGTTGTTAAGCCAATAA

Upstream 100 bases:

>100_bases
AAACTGTATCAGCGTGATCCGCAACCATGATGGCCTACATTGAAAATTGTCTACATGAAAACCTGTCTACACTGAAAGCG
CCTTAAGGAGTTATCCGATT

Downstream 100 bases:

>100_bases
AAGGGAGCTACTTAGTATCAGGAGATAGCGCCTGAATATTTAACAATAGTTTATCTGCCCTATCGGACGGTAGTTGCGCA
TCGACAGGTAAGTACCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MNPQQFVHPDEIRTKFSSAMSGMYQAEVPLYSTLLRLVADTNTQEMAQNQELTRHLQQTGEIERLTMERHGAIRVGTAEE
LQMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETSLQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQ
AIKLIVQHETSGGLNRHQADDFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQRGAALTAKGRNLYDHLLQSAQ
DQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAFFRYFPTEKGLITASIQEIQEIQEIQEIQEMTLDELIDNGF
IQYEPLVYEDFLPVSAAGIFQSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLSQ

Sequences:

>Translated_478_residues
MNPQQFVHPDEIRTKFSSAMSGMYQAEVPLYSTLLRLVADTNTQEMAQNQELTRHLQQTGEIERLTMERHGAIRVGTAEE
LQMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETSLQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQ
AIKLIVQHETSGGLNRHQADDFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQRGAALTAKGRNLYDHLLQSAQ
DQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAFFRYFPTEKGLITASIQEIQEIQEIQEIQEMTLDELIDNGF
IQYEPLVYEDFLPVSAAGIFQSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLSQ
>Mature_478_residues
MNPQQFVHPDEIRTKFSSAMSGMYQAEVPLYSTLLRLVADTNTQEMAQNQELTRHLQQTGEIERLTMERHGAIRVGTAEE
LQMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETSLQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQ
AIKLIVQHETSGGLNRHQADDFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQRGAALTAKGRNLYDHLLQSAQ
DQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAFFRYFPTEKGLITASIQEIQEIQEIQEIQEMTLDELIDNGF
IQYEPLVYEDFLPVSAAGIFQSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLSQ

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3292 [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=462, Percent_Identity=54.3290043290043, Blast_Score=468, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 53861; Mature: 53861

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQQFVHPDEIRTKFSSAMSGMYQAEVPLYSTLLRLVADTNTQEMAQNQELTRHLQQTG
CCCCCCCCHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
EIERLTMERHGAIRVGTAEELQMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETS
CHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHH
LQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQAIKLIVQHETSGGLNRHQAD
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCHHHHH
DFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHH
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQR
HHHHCCCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCHHHC
GAALTAKGRNLYDHLLQSAQDQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAF
CCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FRYFPTEKGLITASIQEIQEIQEIQEIQEMTLDELIDNGFIQYEPLVYEDFLPVSAAGIF
HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHCCCCHHHHHHH
QSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLSQ
HHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPQQFVHPDEIRTKFSSAMSGMYQAEVPLYSTLLRLVADTNTQEMAQNQELTRHLQQTG
CCCCCCCCHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
EIERLTMERHGAIRVGTAEELQMLRRLFAVMGMVPVGYYDLAPAGVPVHSTAFRAVHETS
CHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHH
LQACPFRVFTSLLRLELIEQPTLRQLAADILAKRTIFTPQAIKLIVQHETSGGLNRHQAD
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCHHHHH
DFIAQSLETFRWHHQATVSTETYQQLHDQHRLIADVVAFKGPHINHLTPRTLNIDVVQTA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHH
MAEHNMMPKAVIEGPPPRHCPILLRQTSFKALEEKIAFVSNGGQIIPGHHTARFGEIEQR
HHHHCCCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCHHHC
GAALTAKGRNLYDHLLQSAQDQLNVPVNENNAAQYSAILSEKFSQFPDDYPTMRAEKLAF
CCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FRYFPTEKGLITASIQEIQEIQEIQEIQEMTLDELIDNGFIQYEPLVYEDFLPVSAAGIF
HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHCCCCHHHHHHH
QSNLGEKGQSHFTGHSNKADFQRDLGIAVIDELQLYEATQQRSVAECAAALKLTLLSQ
HHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]