Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153948712

Identifier: 153948712

GI number: 153948712

Start: 229735

End: 231243

Strand: Reverse

Name: 153948712

Synonym: YpsIP31758_0202

Alternate gene names: NA

Gene position: 231243-229735 (Counterclockwise)

Preceding gene: 153947994

Following gene: 153949769

Centisome position: 4.9

GC content: 32.14

Gene sequence:

>1509_bases
ATGGGCCCCCTATCCTCACCCAGCAATGTCTACTCGATACCAAATAGTGAACCTGGTAAAAATACCTTCCTTGACGATGA
GGAAAAGGGTTTTGCAATATTAATGAAAAAAATATCAAAAGATGTCAGTCAGGCAGATCAACACGACCTTCAGAGATTAA
AAAGAGCAGTGTTAGAAAACATATGTGAAGATAATACTGCTTCCACAACACTAATGTTTTCAGGTATGGATTTTAGAGGG
GTGGATTTAAGTAATCTTAATTTATCCGGAGCTGAGTTAGATTTCACTGATCTTAGTGATACAAACATGACAAATACAAA
TTTAAAAAAAGCGTTTATTTGCAATGCGAAACTCAACAATATCCACTGGGAAAATACTGACATTACAGATATCAGTATAG
AGCTTGATGATATCCACTTACTTCCTCTCACTGCTCCAGAGCAATATAAGATGCTAGAGAAAAACGTGGAGATAATAGAA
AATTATAACGATGGCTATAAAGAAATAGATAAAATTGAAAAATTCAAAGAAGTACTTGATGTAAAAAATAAAATACAACA
ACGTTTTCATAATTTAGATAACAAACAGTTACAAATACTACTCCCTTGTTTGTATGTTGAAGCAGCACATCGACTAAATC
CCGTAATGGCATATCGTGAAAAAGATAAAGGTTATTCTGCTACAGAAGAAAATGATAATGTCCTTATGATAGAAGGATAC
ACCAGCTTACTCTCTACGCTCAATAACGCATTAACGCCTAATGAAAATCAATGCCATGCGGAAAGAGTAAAAAACATAGC
ACTAGGAATTGAAAAATTAATTGAGATACTACTAGGTAGTAATACTTTATGCATCGAAAATTTAACATCCTATTTTAGGG
TGCATAACAGCCAAATCTATAAATTTAAAACATTACATAAGGAGATAGAAAAAGGAAAATTAACACTCAACGCGTTGAAA
TATGATATCGGTTTAACAATTGATACAAATGGCGAAGTAACATTTAATGGCGTTATTGATAATACCATTGAAAATAAAAA
TAAAATCCTTTATGAATTTTCAAATAAATTAGTTAGTGCTCATGCAAAAAATGATATTGTTGAAATATTTAAATTAACAT
CAGACTTTCAATACCTTCACCTATTGCCAAATGCTAATGGTCGAGTAAGTCAGATAATCCGTGATTGTTTCTCTATACAT
TTAGGTCAGTTACCGTTTTCAGCCTTGAATTCTATGTCTCACTATCTTTATCTCAACGAACCTGTTGATAAAAGACATTT
ACTCTTCATGCAGAATAATTTTGATGAAGTCTTCACCGCTATTGAAAAAAGAGAATTAACTGTAAATATTTATAGAAAGA
CACGGCCAGAAAATCAAGAAGAATTATTGATAATGTCAAAAGACGAGCCTGTCATAAAACTGGACGTGGATATATTAGCT
GCATCCCTGGAGCATAATAAAAAAATAAAAAATGATGAGTTCGAAGCATTCGAAAACGAATATAAATAA

Upstream 100 bases:

>100_bases
ACACCCGATTACTTATAAGCATAAATAAGGAAACAATCTCCCTTGTTACAAAGTAACACTCAGCCAAAATTATTATTCAT
TCTTAATTATAGGAAAATTC

Downstream 100 bases:

>100_bases
CTCTCATTGCTACCAGCGTCAATCTTCTCTCTTTCTTATTAGAGATAGCCAATAAAACCTGTTTTTATTGGCTATTCGCT
TGTCAGCATATCAATGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MGPLSSPSNVYSIPNSEPGKNTFLDDEEKGFAILMKKISKDVSQADQHDLQRLKRAVLENICEDNTASTTLMFSGMDFRG
VDLSNLNLSGAELDFTDLSDTNMTNTNLKKAFICNAKLNNIHWENTDITDISIELDDIHLLPLTAPEQYKMLEKNVEIIE
NYNDGYKEIDKIEKFKEVLDVKNKIQQRFHNLDNKQLQILLPCLYVEAAHRLNPVMAYREKDKGYSATEENDNVLMIEGY
TSLLSTLNNALTPNENQCHAERVKNIALGIEKLIEILLGSNTLCIENLTSYFRVHNSQIYKFKTLHKEIEKGKLTLNALK
YDIGLTIDTNGEVTFNGVIDNTIENKNKILYEFSNKLVSAHAKNDIVEIFKLTSDFQYLHLLPNANGRVSQIIRDCFSIH
LGQLPFSALNSMSHYLYLNEPVDKRHLLFMQNNFDEVFTAIEKRELTVNIYRKTRPENQEELLIMSKDEPVIKLDVDILA
ASLEHNKKIKNDEFEAFENEYK

Sequences:

>Translated_502_residues
MGPLSSPSNVYSIPNSEPGKNTFLDDEEKGFAILMKKISKDVSQADQHDLQRLKRAVLENICEDNTASTTLMFSGMDFRG
VDLSNLNLSGAELDFTDLSDTNMTNTNLKKAFICNAKLNNIHWENTDITDISIELDDIHLLPLTAPEQYKMLEKNVEIIE
NYNDGYKEIDKIEKFKEVLDVKNKIQQRFHNLDNKQLQILLPCLYVEAAHRLNPVMAYREKDKGYSATEENDNVLMIEGY
TSLLSTLNNALTPNENQCHAERVKNIALGIEKLIEILLGSNTLCIENLTSYFRVHNSQIYKFKTLHKEIEKGKLTLNALK
YDIGLTIDTNGEVTFNGVIDNTIENKNKILYEFSNKLVSAHAKNDIVEIFKLTSDFQYLHLLPNANGRVSQIIRDCFSIH
LGQLPFSALNSMSHYLYLNEPVDKRHLLFMQNNFDEVFTAIEKRELTVNIYRKTRPENQEELLIMSKDEPVIKLDVDILA
ASLEHNKKIKNDEFEAFENEYK
>Mature_501_residues
GPLSSPSNVYSIPNSEPGKNTFLDDEEKGFAILMKKISKDVSQADQHDLQRLKRAVLENICEDNTASTTLMFSGMDFRGV
DLSNLNLSGAELDFTDLSDTNMTNTNLKKAFICNAKLNNIHWENTDITDISIELDDIHLLPLTAPEQYKMLEKNVEIIEN
YNDGYKEIDKIEKFKEVLDVKNKIQQRFHNLDNKQLQILLPCLYVEAAHRLNPVMAYREKDKGYSATEENDNVLMIEGYT
SLLSTLNNALTPNENQCHAERVKNIALGIEKLIEILLGSNTLCIENLTSYFRVHNSQIYKFKTLHKEIEKGKLTLNALKY
DIGLTIDTNGEVTFNGVIDNTIENKNKILYEFSNKLVSAHAKNDIVEIFKLTSDFQYLHLLPNANGRVSQIIRDCFSIHL
GQLPFSALNSMSHYLYLNEPVDKRHLLFMQNNFDEVFTAIEKRELTVNIYRKTRPENQEELLIMSKDEPVIKLDVDILAA
SLEHNKKIKNDEFEAFENEYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57628; Mature: 57497

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPLSSPSNVYSIPNSEPGKNTFLDDEEKGFAILMKKISKDVSQADQHDLQRLKRAVLEN
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICEDNTASTTLMFSGMDFRGVDLSNLNLSGAELDFTDLSDTNMTNTNLKKAFICNAKLNN
HHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCEECC
IHWENTDITDISIELDDIHLLPLTAPEQYKMLEKNVEIIENYNDGYKEIDKIEKFKEVLD
EEECCCCEEEEEEEECCEEEEECCCCHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHH
VKNKIQQRFHNLDNKQLQILLPCLYVEAAHRLNPVMAYREKDKGYSATEENDNVLMIEGY
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEECH
TSLLSTLNNALTPNENQCHAERVKNIALGIEKLIEILLGSNTLCIENLTSYFRVHNSQIY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCEEE
KFKTLHKEIEKGKLTLNALKYDIGLTIDTNGEVTFNGVIDNTIENKNKILYEFSNKLVSA
HHHHHHHHHHHCCEEEEEEEEEEEEEEECCCCEEECCEECCCCCCCCCEEHHHHHHHHHH
HAKNDIVEIFKLTSDFQYLHLLPNANGRVSQIIRDCFSIHLGQLPFSALNSMSHYLYLNE
HHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECC
PVDKRHLLFMQNNFDEVFTAIEKRELTVNIYRKTRPENQEELLIMSKDEPVIKLDVDILA
CCCCCEEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEHHHHH
ASLEHNKKIKNDEFEAFENEYK
HHHHHCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
GPLSSPSNVYSIPNSEPGKNTFLDDEEKGFAILMKKISKDVSQADQHDLQRLKRAVLEN
CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICEDNTASTTLMFSGMDFRGVDLSNLNLSGAELDFTDLSDTNMTNTNLKKAFICNAKLNN
HHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCEECC
IHWENTDITDISIELDDIHLLPLTAPEQYKMLEKNVEIIENYNDGYKEIDKIEKFKEVLD
EEECCCCEEEEEEEECCEEEEECCCCHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHH
VKNKIQQRFHNLDNKQLQILLPCLYVEAAHRLNPVMAYREKDKGYSATEENDNVLMIEGY
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEECH
TSLLSTLNNALTPNENQCHAERVKNIALGIEKLIEILLGSNTLCIENLTSYFRVHNSQIY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCEEE
KFKTLHKEIEKGKLTLNALKYDIGLTIDTNGEVTFNGVIDNTIENKNKILYEFSNKLVSA
HHHHHHHHHHHCCEEEEEEEEEEEEEEECCCCEEECCEECCCCCCCCCEEHHHHHHHHHH
HAKNDIVEIFKLTSDFQYLHLLPNANGRVSQIIRDCFSIHLGQLPFSALNSMSHYLYLNE
HHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECC
PVDKRHLLFMQNNFDEVFTAIEKRELTVNIYRKTRPENQEELLIMSKDEPVIKLDVDILA
CCCCCEEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEHHHHH
ASLEHNKKIKNDEFEAFENEYK
HHHHHCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA