Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 153948700

GI number: 153948700

Start: 2234704

End: 2235603

Strand: Reverse

Name: trpH [H]

Synonym: YpsIP31758_1930

Alternate gene names: 153948700

Gene position: 2235603-2234704 (Counterclockwise)

Preceding gene: 153948199

Following gene: 153949288

Centisome position: 47.33

GC content: 52.0

Gene sequence:

>900_bases
ATGAAAGAACTCACTGACGCCACGACGTTATCTACTGCTTTTACGCTTTATGATCTACATAGCCATACAACGGCTTCCGA
TGGCACGTTGACGCCATCAGAGCTGGTGATCAGAGCGGCACAGATGCGTGTTGGGGTTCTGGCTATCACTGATCACGATA
CCACTGCTGGTTTGGCAGAAGCGGCGGCGGCGATTGAACAGCATCAATTAGCGCTACGATTGATCCCCGGTGTTGAGATT
TCCACCCTATGGGAAAATCATGAGATCCACATTGTGGGCCTGGGTATTGATGTTCAGCATGTGAGTCTCCGTACGTTACT
TGAGGCACAGTCTGAGCACCGTTATCAGCGGGCCCAAGAGATCAGCACCCGTCTGGAGAAAGCACGTATTGTGGGCGCAT
GGGAAGGGGCTAACCGGTTGGCAAACGGTGGGCAGGTGACCCGTGGGCATTTTGCGCGTTATCTGGTTGAGTTAGGGCTG
GCCAGCAATGTTGGTCAGGTGTTTAAAAAGTATTTAGCTAAAGGCAAGACCGGTTATGTTCCTGCTCAGTGGTGTACAAT
AGAACAAGCTATTGATGCGATTAAGCAATCAGGTGGACAAGCGGTATTGGCCCATCCTGGCCGTTATGATTTAACGGCAA
AATGGTTAAAGCGTTTATTGGCCCATTTTGCTGAACATGGCGGGGACGCGATGGAAGTTGCCCAGTGCCAACAAGCCCCT
CACGAGCGGGCGCTACTGGGTCAATACGCACGCGATTATCATTTACTGGCATCCCAGGGGTCTGATTTCCATCAACCTTG
TTCTTGGATTGAATTGGGTCGCAAATTGTGGCTGCCCGCTGGGGTGGAACCGGTATGGCGAGATTGGCCTACAGAGCCAG
CCATGCCGCTCGTACGTTGA

Upstream 100 bases:

>100_bases
GATGTAAGATTGATTAACGTTCGCGTCTTGTAAGCGGGTATGATAGCCAACCCTATTTTACTGGATGATTGTTTTGAGTG
CTGAGCCAGCGTTACCGGAT

Downstream 100 bases:

>100_bases
ATAATGAGGTAGAATCATGAGTCAATTTTTTTATATCCACCCGGACAATCCACAGCCCCGCCTGATCAACCAATGTGTTG
ATGTTTTACGTAAGGGCGGA

Product: phosphotransferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLAITDHDTTAGLAEAAAAIEQHQLALRLIPGVEI
STLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQEISTRLEKARIVGAWEGANRLANGGQVTRGHFARYLVELGL
ASNVGQVFKKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGGDAMEVAQCQQAP
HERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRDWPTEPAMPLVR

Sequences:

>Translated_299_residues
MKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLAITDHDTTAGLAEAAAAIEQHQLALRLIPGVEI
STLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQEISTRLEKARIVGAWEGANRLANGGQVTRGHFARYLVELGL
ASNVGQVFKKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGGDAMEVAQCQQAP
HERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRDWPTEPAMPLVR
>Mature_299_residues
MKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLAITDHDTTAGLAEAAAAIEQHQLALRLIPGVEI
STLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQEISTRLEKARIVGAWEGANRLANGGQVTRGHFARYLVELGL
ASNVGQVFKKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGGDAMEVAQCQQAP
HERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRDWPTEPAMPLVR

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=275, Percent_Identity=72.7272727272727, Blast_Score=406, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 33010; Mature: 33010

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLAITDHDTTAGLAE
CCCCHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHH
AAAAIEQHQLALRLIPGVEISTLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQE
HHHHHHHHHHHHEECCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ISTRLEKARIVGAWEGANRLANGGQVTRGHFARYLVELGLASNVGQVFKKYLAKGKTGYV
HHHHHHHHHHEEEECCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGGDAMEVAQCQQAP
CHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
HERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRDWPTEPAMPLVR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLAITDHDTTAGLAE
CCCCHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHH
AAAAIEQHQLALRLIPGVEISTLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQE
HHHHHHHHHHHHEECCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ISTRLEKARIVGAWEGANRLANGGQVTRGHFARYLVELGLASNVGQVFKKYLAKGKTGYV
HHHHHHHHHHEEEECCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGGDAMEVAQCQQAP
CHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
HERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRDWPTEPAMPLVR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]