| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948660
Identifier: 153948660
GI number: 153948660
Start: 4036473
End: 4037705
Strand: Direct
Name: 153948660
Synonym: YpsIP31758_3576
Alternate gene names: NA
Gene position: 4036473-4037705 (Clockwise)
Preceding gene: 153950419
Following gene: 153948242
Centisome position: 85.46
GC content: 44.44
Gene sequence:
>1233_bases ATGCTAAACTCTGGTGCTAAAAACCTATTACTGACTATTCTGTTGGGTACATCTCCCTTTATTTATGCTGCAGAAAGTCA TCCGTTGTTATTAAAAATGGACGATATTAACTACAGCATTGAACAGATTAAACAAAACAACCCGTTATATGAAAAATCTT ATAAAAATCTGATGGCTAAGGCCGACAAGGCACTAAAAAAACCACTGTACTCCGTCATGGATAAAAGCCTCTTGGCCGCC AGTGGTGATAAACACGACTATTACAGCTTCCCACCTTATTGGTGGCCAGACCCAAGCAAGAAAGACGGTATGCCTTATTT ACGTAAGGATGGGGAAACAAATCCTGCGGCCAACAGTGATGCCACCGATAAAAAGCGCATGAACAGCTTCAGTGAAGACG TCTATTATCTGGCGTTGGCTTATAGCTTTACCGGTAAGCCTGAGTATGCCCAAAAAGCGCATGAACAATTGGTCAATTGG TTCGTGAATCCAGAGACTAAAATGAATCCAAATCTGCAATATGCGCAGGCCATTCCGGGGATTAACGAAGGCCGAGGTAT TGGTTTGATCGATAGCCGGGCGCTAGTTGATGTGATTGATGCCGTTGAATTGATCAGACCCGCCAATGTTCTCAGTGACA GCGACTATCAGGCCATTAAAAGTTGGTATGGTGATTTTTATCAATGGATGACCACCAGCCAAAATGGTTTCGAAGAAGAT AACTGGCACAATAACCACGGCACCTATTTTGATATGCAGGCGGCCTCTTTTGCCCTGTTCAGCGATCAAAAAGCCGCTGC ACAGAAACGTTTGGAAATCACGCAATTACGCCGTATTCCCTCACATTTTGATATGCAAGGCCGACAAAATGCCGAGTTGG AGCGCACCCGCCCATGGCATTACAGTAACTTCCATCTAGAGGCCTACAATAAATTGGGCCGTCTTGGGGAGGTTGGCGAG AAAGATATCTGGGATTTCAGTCTGGATGAGCACAGCCTGAAAAAAGGCTATCAGTACGTTGCCGGTTTCATCAATACCGA CCAAGCCTGGCCGTATAAAGATCTGGACGGAGTACAGGATAAAAAAGCCTTGGTCAATATGATTACTGCCGCTCGCGCCT ACCCTGCTGACGTTGAATTCCAACAAAAAGCACAATACCTGATAGCAAAATACCCAGATACCGTTGAAATCTTACTTTAC CCAATCACACAGAACCTGATAACGCAAAAATAA
Upstream 100 bases:
>100_bases TAAATAAGTACAATTTTTATTTAAAATATGAGTGATCAATATATTAAATTAATAATTTTTTATTTACACCGTTTAATCCA TAAAAATAAGGAAAGTGATG
Downstream 100 bases:
>100_bases GCATCGCCGAGGACACGCCAGATATGAAGCAGTTTACGGATCGGCAGATGGTTAAAATCCGCCAGCGCGTTGTGAAACAA CCGGAGATTATTGCCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLLAA SGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNW FVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDSDYQAIKSWYGDFYQWMTTSQNGFEED NWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEVGE KDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLY PITQNLITQK
Sequences:
>Translated_410_residues MLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLLAA SGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNW FVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDSDYQAIKSWYGDFYQWMTTSQNGFEED NWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEVGE KDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLY PITQNLITQK >Mature_410_residues MLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLLAA SGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNW FVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDSDYQAIKSWYGDFYQWMTTSQNGFEED NWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEVGE KDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLY PITQNLITQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47049; Mature: 47049
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAK CCCCCHHHEEEEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHH ADKALKKPLYSVMDKSLLAASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC ATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNWFVNPETKMNPNLQYAQAIPG CHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC INEGRGIGLIDSRALVDVIDAVELIRPANVLSDSDYQAIKSWYGDFYQWMTTSQNGFEED CCCCCCCCEECCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC NWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWH CCCCCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC YSNFHLEAYNKLGRLGEVGEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQD CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH KKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLYPITQNLITQK HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEEHHHHHHCCC >Mature Secondary Structure MLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAK CCCCCHHHEEEEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHH ADKALKKPLYSVMDKSLLAASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC ATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNWFVNPETKMNPNLQYAQAIPG CHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC INEGRGIGLIDSRALVDVIDAVELIRPANVLSDSDYQAIKSWYGDFYQWMTTSQNGFEED CCCCCCCCEECCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC NWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWH CCCCCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC YSNFHLEAYNKLGRLGEVGEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQD CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH KKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLYPITQNLITQK HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEEHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA