Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153948614

Identifier: 153948614

GI number: 153948614

Start: 3500505

End: 3500675

Strand: Reverse

Name: 153948614

Synonym: YpsIP31758_3109

Alternate gene names: NA

Gene position: 3500675-3500505 (Counterclockwise)

Preceding gene: 153950713

Following gene: 153948038

Centisome position: 74.11

GC content: 45.03

Gene sequence:

>171_bases
ATGTCACGTCATAGCATTCCAGCTAATGAGGGATTTTCTGGGCATAACCCGCCAGAACATCAGATCCGTCGTATTCAGAC
CAAAAATTTATTACCGGCTATTCTAGCGGATAACGTGGGGGAAATCGTGGCGTTTAGGTCTGGTTTTAGTACGCAGTGGC
ACATCATATAA

Upstream 100 bases:

>100_bases
AAGCGGCTTTTTTCGGCATAGTTTTCGTCGACTCAATGTTTTCTATGGAACGTAACATCAATTAACGTAACGTTATGAAT
TAATGTAGCGTCATAAATTA

Downstream 100 bases:

>100_bases
TGATATACTCCACGGCTTGCATATTTTCGCTAACGTTTATGGCCGTTGCTTTCAATAGCAACGCTATCATTCCATCACTA
GACAACTAAAAGCCGCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MSRHSIPANEGFSGHNPPEHQIRRIQTKNLLPAILADNVGEIVAFRSGFSTQWHII

Sequences:

>Translated_56_residues
MSRHSIPANEGFSGHNPPEHQIRRIQTKNLLPAILADNVGEIVAFRSGFSTQWHII
>Mature_55_residues
SRHSIPANEGFSGHNPPEHQIRRIQTKNLLPAILADNVGEIVAFRSGFSTQWHII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6290; Mature: 6159

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHSIPANEGFSGHNPPEHQIRRIQTKNLLPAILADNVGEIVAFRSGFSTQWHII
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCEEEEEC
>Mature Secondary Structure 
SRHSIPANEGFSGHNPPEHQIRRIQTKNLLPAILADNVGEIVAFRSGFSTQWHII
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA