| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948583
Identifier: 153948583
GI number: 153948583
Start: 3376010
End: 3377638
Strand: Reverse
Name: 153948583
Synonym: YpsIP31758_2995
Alternate gene names: NA
Gene position: 3377638-3376010 (Counterclockwise)
Preceding gene: 153949653
Following gene: 153950805
Centisome position: 71.51
GC content: 52.67
Gene sequence:
>1629_bases ATGAAAACATGGATAGCGCGTCTTTTAGGTAAAGATATTTCAATTGATTTTCCAGCCCCTTGGGCGGCCGATAGCACGGC AATTTATCGTTGGTTGGCGACTTGGCCGGATAGCGAAGGGCCTCTGCCCGCAGAGGCAGAAACCTTGCCGGATGAGCCTT CGGCCATTGAGGGTAAAATCCGGTGGTCGGCTGGAGCGCTTGATGGTGTCTTTGGGCACCATGTTGCAGAGGCTGATGAT GAAACTCCGGTTGAGGCCATCATGGCGGCACTGAGAAGTGTGTTGCATAAGCCGCAGCAGCAGGATATCGAGCAACTGTA TCGTTTGTTGTGCCATGCGTCGCCGTTAAATTATCTCGATGTCTTGCTCCCTGCGGTTGCGCAAGATCCGCAACTGCCCG CCAATAAATTGCAGGCGTTGGCAGAATGGCTGGCAACCGAAAGCCCAGATCGCAACGCCGTTAAGGTAGCCATAGCGCTA TTGGGCTTTTTCCCAACGCAGAAAAGTTGTCAGATACTCAGTACATTGGGGGCACATGACGAGTTTACGCTTTATGCGGC AGTGGCACTGAGATCCATACTGCCAGAGGATGAATATGAACGTGCCTGGCTTGCGATGGCGAAGCGTGCTGGTGGCTGGG GAAGAGTGCAGTTGATCGAGCGTTTGCCCGAATTTTTGAGCAAACAGAGTCGCGATTGGTTGTTGCGCGAGGGTTACCGT AACGCGGTGATGTATGAATACACTGCCTGGCATTGTGCGACTCACGGGCAATTACTTCAGGCAATGCAACAACTTCAGAC AATGCAAAAACAGCCCGATGCGCCGCTATTACTGGGGGCTGCAGAGATTTTGCAGGCGTTAATTAACGGCGGTCCAGCGC AAAATATGCATGATTACGCCGAAGGTGCGCTGGCTTGTGAATACTATCTGCGCTGTTTGCAGGCGGCTCCCCCGGCAGAA ATACAGCATTATCTGGCGGCGAGTGAGATTGCGCGTTTTGCACAGGAACAAAATAGCGAAGAGGAGGGCGTATGGGATCA GGCACAGTGCAACAACTTGGTCGAATTGGCCAATGTTGTCATGGCACTGCCGGAATGGTCGGGTATCATCGCCAATAACT TGCAGGGAAGTGATACGTATCTTTTTAACCTGGCCGTTTCCGCTAGCCGGTTACGCCAGCAGGATCCGTGGGAGAGTATT TTCGCGCGGCAGTTGGCGGATGCAGCAGATAACAATTGGTACCAGTTAATGCAGACTGCCCAGCCTGAGCATATCGCCAG AGTGATATCGCTGGCTGAACAGCAGTTGGATTTAGAGGCTATCGCTTCCGGGCCAGGAATGGCTATGGGGCTCGGGTTGG AGTACCAGCAGCATCAGGCATTGGATTTTGTACTGCAGGATCTGAAAAAATTCCCAGGAATGGGCTGGTCATTGTTGGCG GTGGGGTTACGTAGTGAGAGGATCCGTGACCGGTCTATGGCGCTAAACGCATTGGACGTTTGGCCTCAGGATGATTGGTC GCCTGATATGTCACAGGCGTTGGCGGATAGTTTATGTCATGAGCCCGATGAACAGATGCGGGAGCGTTTGCATAAGTTAT GTGTCAATCTTGGGATCACCACGGGCTGA
Upstream 100 bases:
>100_bases AGGCCAATGTTCGGCAGGCACCCCTGCCAAATAGCCCGGTTTGTCGCGACCAATCGCTGGATCAACGGCTTTATCGCACG GTGATGTTAAGGATAGAAAA
Downstream 100 bases:
>100_bases CCCAGATAGTTTTTGAAAAACGCCCTGGCAGAGATGGAAAAGCAGCAGGGCGTTAGCAAAGCATTGAAAGCTCAGTCATT ACAATGAATTGATTTCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSEGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIAL LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR NAVMYEYTAWHCATHGQLLQAMQQLQTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG
Sequences:
>Translated_542_residues MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSEGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIAL LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR NAVMYEYTAWHCATHGQLLQAMQQLQTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG >Mature_542_residues MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSEGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIAL LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR NAVMYEYTAWHCATHGQLLQAMQQLQTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60380; Mature: 60380
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSEGPLPAEAETLPDEPSAIEGKI CHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE RWSAGALDGVFGHHVAEADDETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLD EECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH VLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIALLGFFPTQKSCQILSTLGAHD HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC EFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC NAVMYEYTAWHCATHGQLLQAMQQLQTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYA CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHH EGALACEYYLRCLQAAPPAEIQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH MALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESIFARQLADAADNNWYQLMQTA HHCCCCCCHHHCCCCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC QPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHH VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGIT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC TG CC >Mature Secondary Structure MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSEGPLPAEAETLPDEPSAIEGKI CHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE RWSAGALDGVFGHHVAEADDETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLD EECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH VLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIALLGFFPTQKSCQILSTLGAHD HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC EFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC NAVMYEYTAWHCATHGQLLQAMQQLQTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYA CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHH EGALACEYYLRCLQAAPPAEIQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH MALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESIFARQLADAADNNWYQLMQTA HHCCCCCCHHHCCCCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC QPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHH VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGIT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC TG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA