| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948534
Identifier: 153948534
GI number: 153948534
Start: 2520904
End: 2522103
Strand: Reverse
Name: 153948534
Synonym: YpsIP31758_2200
Alternate gene names: NA
Gene position: 2522103-2520904 (Counterclockwise)
Preceding gene: 153949625
Following gene: 153948980
Centisome position: 53.4
GC content: 46.5
Gene sequence:
>1200_bases ATGGCAACCATTAATCGTTACGGAGTTACTGGCACTACGTTGAGTGAATATCTGGATACCATGCGCCAGCATTATCTTGC TATTGATGATGGCTGGAATATTAATCCGGAATCACCGGATGGTTTGGCAATCGCTATTTGGTGTGAGGTATTAGCCAATT TGGATGAAGCGGTGATTAATGCCTATCACGCCGCAGATCCCCATTCAGCGATTGACCAACAATTAGATCGCATCGCCGCA TTTGCTGGAATCAAACGCAAAAGTGCGACCTATTCAACCGTGACCGTTAATTTTCACGGTATCGCTTTTACCCCTGTCAG GGCCGGAACATTAATCAGAAACAGAGTAACCAATACTTTATGGGCGACCGATGGTGATGTTGTCACCGACGCGGCAGGTA ATGCGACGGTTAACGCCACTTGTACGTTGGCTGGAGCGCAGGGGGCTAATAGCGATAACCTGACAATCATCGCGACCCCC ATCGGCGGTATTACAGCAGTGACTAATGGCGCGACGGCTTCAATGGGGCTGGATAAAGAAACCAATAATGCGTTTCGCAT TCGACGCAATGAGTCAGTCGCGTTACCAGGATCAAACCAGATTGATAATATTTATGCGGCACTGGTCAATATTGAGGATG TTAAACGGGCGCGTATCTATGAAAACGTTGAGGATCAAGCGGATGAGAATGGGATATTCGGCCACTCAATGGCGATATTT GTTGATGGTGGCAGCATTGAGGATGTGATCTGCAGTATCGCAACCAATAAAAGCCCCGGCTGCGGGCTGAACCGCTACAA CACATTTCCCAATAAAATCTCGTTGGATACTGTTACACCAAAAGGTAACCCGATCACCGTAACCTTCTTTCGCCCACAAC TGGTACCGGTTTATGCAAAGGTAGAGGTTGTCAGCAATGCTGAATTCATTGACGATGAAATAAAGCAGGCCATTGTTGAG TACAGCATTACTGGCTTTGATCAGACCAATGGGTTTTCTAAGCTGGGCTTTAAAATTGGTGAAAATATTGGAGCTGGCCG CTTATTTACCCCTGTCAATCATTTGGTGGCTGGTAATGGCTTTGTCAATGCAATCACTGTAGGCACCACTATCGAACAGG CCAGCAATAGCGTAGTGAGGATCGCCTTTAACCAGTTAGGCATATTTAGTGCCGAAAATATCGAGGTGGTCTATGTATAA
Upstream 100 bases:
>100_bases TGGATCTGGATATGAAGAATCGTAAAATTACGGTATTTGCTGCTGTGATCGATATTCATAACGATGCATTTGATTTCCTG TTGACTGAGGATTTGTTCTG
Downstream 100 bases:
>100_bases CCACCATAAAAAAGCATTGTCACGAATTTATCTGCAATACAAAAATGCACCGAAATTAGTTGAATGGTTGGGTATCTTAC CGGCTATCAGTCAATCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Baseplate J Family Protein; Phage Protein
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MATINRYGVTGTTLSEYLDTMRQHYLAIDDGWNINPESPDGLAIAIWCEVLANLDEAVINAYHAADPHSAIDQQLDRIAA FAGIKRKSATYSTVTVNFHGIAFTPVRAGTLIRNRVTNTLWATDGDVVTDAAGNATVNATCTLAGAQGANSDNLTIIATP IGGITAVTNGATASMGLDKETNNAFRIRRNESVALPGSNQIDNIYAALVNIEDVKRARIYENVEDQADENGIFGHSMAIF VDGGSIEDVICSIATNKSPGCGLNRYNTFPNKISLDTVTPKGNPITVTFFRPQLVPVYAKVEVVSNAEFIDDEIKQAIVE YSITGFDQTNGFSKLGFKIGENIGAGRLFTPVNHLVAGNGFVNAITVGTTIEQASNSVVRIAFNQLGIFSAENIEVVYV
Sequences:
>Translated_399_residues MATINRYGVTGTTLSEYLDTMRQHYLAIDDGWNINPESPDGLAIAIWCEVLANLDEAVINAYHAADPHSAIDQQLDRIAA FAGIKRKSATYSTVTVNFHGIAFTPVRAGTLIRNRVTNTLWATDGDVVTDAAGNATVNATCTLAGAQGANSDNLTIIATP IGGITAVTNGATASMGLDKETNNAFRIRRNESVALPGSNQIDNIYAALVNIEDVKRARIYENVEDQADENGIFGHSMAIF VDGGSIEDVICSIATNKSPGCGLNRYNTFPNKISLDTVTPKGNPITVTFFRPQLVPVYAKVEVVSNAEFIDDEIKQAIVE YSITGFDQTNGFSKLGFKIGENIGAGRLFTPVNHLVAGNGFVNAITVGTTIEQASNSVVRIAFNQLGIFSAENIEVVYV >Mature_398_residues ATINRYGVTGTTLSEYLDTMRQHYLAIDDGWNINPESPDGLAIAIWCEVLANLDEAVINAYHAADPHSAIDQQLDRIAAF AGIKRKSATYSTVTVNFHGIAFTPVRAGTLIRNRVTNTLWATDGDVVTDAAGNATVNATCTLAGAQGANSDNLTIIATPI GGITAVTNGATASMGLDKETNNAFRIRRNESVALPGSNQIDNIYAALVNIEDVKRARIYENVEDQADENGIFGHSMAIFV DGGSIEDVICSIATNKSPGCGLNRYNTFPNKISLDTVTPKGNPITVTFFRPQLVPVYAKVEVVSNAEFIDDEIKQAIVEY SITGFDQTNGFSKLGFKIGENIGAGRLFTPVNHLVAGNGFVNAITVGTTIEQASNSVVRIAFNQLGIFSAENIEVVYV
Specific function: Unknown
COG id: COG3299
COG function: function code S; Uncharacterized homolog of phage Mu protein gp47
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42717; Mature: 42586
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATINRYGVTGTTLSEYLDTMRQHYLAIDDGWNINPESPDGLAIAIWCEVLANLDEAVIN CCCEECCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEHHHHHHCCHHHHHH AYHAADPHSAIDQQLDRIAAFAGIKRKSATYSTVTVNFHGIAFTPVRAGTLIRNRVTNTL HHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEECCCCCHHHHHHHCCEE WATDGDVVTDAAGNATVNATCTLAGAQGANSDNLTIIATPIGGITAVTNGATASMGLDKE EECCCCEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCEEECCCCCC TNNAFRIRRNESVALPGSNQIDNIYAALVNIEDVKRARIYENVEDQADENGIFGHSMAIF CCCEEEEECCCEEECCCCCCCCCHHHEEECHHHHHHHHHHHCHHHHCCCCCCCCCEEEEE VDGGSIEDVICSIATNKSPGCGLNRYNTFPNKISLDTVTPKGNPITVTFFRPQLVPVYAK EECCCHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEE VEVVSNAEFIDDEIKQAIVEYSITGFDQTNGFSKLGFKIGENIGAGRLFTPVNHLVAGNG EEEECCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCCCCCCEECCHHHHEECCC FVNAITVGTTIEQASNSVVRIAFNQLGIFSAENIEVVYV EEEEEEECCCHHHCCCCEEEEEEHHCCEEECCCEEEEEC >Mature Secondary Structure ATINRYGVTGTTLSEYLDTMRQHYLAIDDGWNINPESPDGLAIAIWCEVLANLDEAVIN CCEECCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEHHHHHHCCHHHHHH AYHAADPHSAIDQQLDRIAAFAGIKRKSATYSTVTVNFHGIAFTPVRAGTLIRNRVTNTL HHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEECCCCCHHHHHHHCCEE WATDGDVVTDAAGNATVNATCTLAGAQGANSDNLTIIATPIGGITAVTNGATASMGLDKE EECCCCEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCEEECCCCCC TNNAFRIRRNESVALPGSNQIDNIYAALVNIEDVKRARIYENVEDQADENGIFGHSMAIF CCCEEEEECCCEEECCCCCCCCCHHHEEECHHHHHHHHHHHCHHHHCCCCCCCCCEEEEE VDGGSIEDVICSIATNKSPGCGLNRYNTFPNKISLDTVTPKGNPITVTFFRPQLVPVYAK EECCCHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEE VEVVSNAEFIDDEIKQAIVEYSITGFDQTNGFSKLGFKIGENIGAGRLFTPVNHLVAGNG EEEECCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCCCCCCEECCHHHHEECCC FVNAITVGTTIEQASNSVVRIAFNQLGIFSAENIEVVYV EEEEEEECCCHHHCCCCEEEEEEHHCCEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA